SMTL ID : 3jtt.1 (2 other biounits)

Cystal structure of Rhesus macaque MHC class I:Mamu-A*02

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-1-1-mer

Ligands

1 x TYR- THR- SER- GLY- PRO- GLY- ILE- ARG- TYR: peptide of Protein Nef(Non-covalent)

TYR-THR-SER-GLY-PRO-GLY-ILE-ARG-TYR.1: 31 residues within 4Å: Chain A: M.5, Y.7, Y.9, M.45, Y.59, R.62, E.63, N.66, M.67, A.69, E.70, N.73, V.76, N.77, N.80, L.81, Y.84, I.95, R.97, Y.99, S.116, Y.123, T.143, K.146, W.147, A.150, E.152, Y.159, E.163, W.167, Y.171 27 PLIP interactions: 27 interactions with chain A Hydrophobic interactions: A:Y.59, A:N.66, A:A.69, A:N.77, A:L.81, A:Y.123, A:T.143, A:A.150, A:E.163 Hydrogen bonds: A:R.62, A:R.62, A:E.63, A:E.70, A:N.73, A:N.77, A:R.97, A:Y.99, A:S.116, A:E.152, A:H.156, A:Y.159, A:Y.171 Water bridges: A:Y.9, A:E.152 pi-Stacking: A:W.147, A:W.167 pi-Cation interactions: A:R.62

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dai, L., Crystal structure of Rhesus macaque MHC class I:Mamu-A*02. To be Published

Release Date

2010-09-15

Peptides

MHC class I Mamu-A*02: A
Beta-2-microglobulin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

MHC class I Mamu-A*02

Beta-2-microglobulin

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