SMTL ID : 3l88.1 (3 other biounits)

Crystal structure of the human Adenovirus type 21 fiber knob

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-trimer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 4 residues within 4Å: Chain B: D.77, N.81, L.82, L.83 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:D.77 NA.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 7 residues within 4Å: Chain C: L.12, G.80, N.81, L.82, P.92, L.93, S.108 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:L.82, C:L.93, C:S.108, C:S.108

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cupelli, K. et al., Structure of adenovirus type 21 knob in complex with CD46 reveals key differences in receptor contacts among species B adenoviruses. J.Virol. (2010)

Release Date

2010-04-14

Peptides

Fiber protein: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Fiber protein

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