- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.85 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER(Non-covalent)
- 6 x CA: CALCIUM ION(Non-covalent)
CA.2: 2 residues within 4Å:- Chain A: F.28, D.30
4 PLIP interactions:2 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:F.28, A:D.30, H2O.2, H2O.4
CA.4: 3 residues within 4Å:- Chain A: D.107, Y.137
- Ligands: ACT.6
5 PLIP interactions:2 interactions with chain A, 3 Ligand-Water interactions- Metal complexes: A:D.107, A:Y.137, H2O.3, H2O.5, H2O.6
CA.8: 2 residues within 4Å:- Chain B: F.28, D.30
4 PLIP interactions:2 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:F.28, B:D.30, H2O.9, H2O.10
CA.10: 3 residues within 4Å:- Chain B: D.107, Y.137
- Ligands: ACT.12
5 PLIP interactions:2 interactions with chain B, 3 Ligand-Water interactions- Metal complexes: B:D.107, B:Y.137, H2O.9, H2O.11, H2O.12
CA.14: 2 residues within 4Å:- Chain C: F.28, D.30
4 PLIP interactions:2 interactions with chain C, 2 Ligand-Water interactions- Metal complexes: C:F.28, C:D.30, H2O.15, H2O.16
CA.16: 3 residues within 4Å:- Chain C: D.107, Y.137
- Ligands: ACT.18
5 PLIP interactions:2 interactions with chain C, 3 Ligand-Water interactions- Metal complexes: C:D.107, C:Y.137, H2O.16, H2O.18, H2O.18
- 6 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
MG.3: 3 residues within 4Å:- Chain A: S.17, T.35
- Ligands: GNP.1
4 PLIP interactions:2 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:S.17, A:T.35, H2O.1, H2O.1
MG.5: 2 residues within 4Å:- Ligands: MG.11, MG.17
No protein-ligand interaction detected (PLIP)MG.9: 3 residues within 4Å:- Chain B: S.17, T.35
- Ligands: GNP.7
4 PLIP interactions:2 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:S.17, B:T.35, H2O.7, H2O.7
MG.11: 2 residues within 4Å:- Ligands: MG.5, MG.17
No protein-ligand interaction detected (PLIP)MG.15: 3 residues within 4Å:- Chain C: S.17, T.35
- Ligands: GNP.13
4 PLIP interactions:2 interactions with chain C, 2 Ligand-Water interactions- Metal complexes: C:S.17, C:T.35, H2O.13, H2O.13
MG.17: 2 residues within 4Å:- Ligands: MG.5, MG.11
No protein-ligand interaction detected (PLIP)- 3 x ACT: ACETATE ION(Non-functional Binders)
ACT.6: 9 residues within 4Å:- Chain A: R.97, K.101, S.106, D.107, D.108, V.109, M.111, Y.137
- Ligands: CA.4
5 PLIP interactions:5 interactions with chain A- Hydrophobic interactions: A:R.97, A:K.101
- Hydrogen bonds: A:V.109
- Water bridges: A:R.97
- Salt bridges: A:R.97
ACT.12: 9 residues within 4Å:- Chain B: R.97, K.101, S.106, D.107, D.108, V.109, M.111, Y.137
- Ligands: CA.10
5 PLIP interactions:5 interactions with chain B- Hydrophobic interactions: B:R.97, B:K.101
- Hydrogen bonds: B:V.109
- Water bridges: B:R.97
- Salt bridges: B:R.97
ACT.18: 9 residues within 4Å:- Chain C: R.97, K.101, S.106, D.107, D.108, V.109, M.111, Y.137
- Ligands: CA.16
5 PLIP interactions:5 interactions with chain C- Hydrophobic interactions: C:R.97, C:K.101
- Hydrogen bonds: C:V.109
- Water bridges: C:R.97
- Salt bridges: C:R.97
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Buhrman, G. et al., Allosteric modulation of Ras positions Q61 for a direct role in catalysis. Proc.Natl.Acad.Sci.USA (2010)
- Release Date
- 2010-03-02
- Peptides
- GTPase HRas: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A
SMTL ID : 3lbh.2 (1 other biounit)
Ras soaked in Calcium Acetate
GTPase HRas
Toggle Identical (ABC)Related Entries With Identical Sequence
121p.1 | 1bkd.1 | 1crp.1 | 1crq.1 | 1crr.1 | 1ctq.1 | 1gnp.1 | 1gnq.1 | 1gnr.1 | 1k8r.1 | 1nvv.1 | 1nvv.2 | 1nvv.3 | 1nvv.4 | 1nvw.1 | 1nvw.2 | 1nvw.3 | 1p2s.1 | 1p2t.1 | 1p2u.1 | 1p2v.1 | 1qra.1 | 1wq1.1 | 1xd2.1 | 2rge.1 | 3k8y.1 | 3kud.1 | 3l8y.1 | 3l8z.1 | 3lbh.1 more...less...3lbi.1 | 3lbi.2 | 3lbn.1 | 3lbn.2 | 3rry.1 | 3rrz.1 | 3rs0.1 | 3rs2.1 | 3rs3.1 | 3rs4.1 | 3rs5.1 | 3rs7.1 | 3rsl.1 | 3rso.1 | 3tgp.1 | 4dls.1 | 4dls.2 | 4dlt.1 | 4dlt.2 | 4dlu.1 | 4dlu.2 | 4dlw.1 | 4dlw.2 | 4g0n.1 | 4nyj.1 | 4nym.1 | 4rsg.1 | 5p21.1 | 7og9.1 | 7oga.1 | 7ogb.1 | 7ogc.1 | 8bos.1 | 8bwg.1 | 8cnj.1 | 8cnn.1 | 8osm.1 | 8osn.1 | 8oso.1 | 8wwc.1 | 8wwc.2