- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- monomer
- Ligands
- 1 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER(Non-covalent)
- 13 x RSF: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-ol(Non-covalent)
RSF.2: 5 residues within 4Å:- Chain A: I.21, V.29, D.33, D.38, Y.40
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:D.38, A:Y.40
RSF.3: 3 residues within 4Å:- Chain A: F.28, D.30, K.147
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:D.30
- Salt bridges: A:K.147
RSF.4: 5 residues within 4Å:- Chain A: D.30, E.31, Y.32
- Ligands: GNP.1, RSF.8
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:Y.32
RSF.5: 4 residues within 4Å:- Chain A: F.28, D.30, K.147
- Ligands: GNP.1
1 PLIP interactions:1 interactions with chain A- Salt bridges: A:K.147
RSF.6: 7 residues within 4Å:- Chain A: L.23, N.26, K.42, V.44, R.149, E.153, Y.157
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:R.149, A:R.149
- Salt bridges: A:K.42, A:R.149
RSF.7: 3 residues within 4Å:- Chain A: D.33, P.34
- Ligands: RSF.14
1 PLIP interactions:1 interactions with chain A- Hydrophobic interactions: A:D.33
RSF.8: 7 residues within 4Å:- Chain A: G.12, G.13, Y.32, N.86, K.117
- Ligands: RSF.4, RSF.12
No protein-ligand interaction detected (PLIP)RSF.9: 6 residues within 4Å:- Chain A: E.37, T.58, A.59, M.72, Y.96, Q.99
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:Q.99
RSF.10: 2 residues within 4Å:- Chain A: Q.95, Q.99
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:Q.99
- Hydrogen bonds: A:Q.95
RSF.11: 3 residues within 4Å:- Chain A: E.143, Q.150, G.151
1 PLIP interactions:1 interactions with chain A- Water bridges: A:G.151
RSF.12: 6 residues within 4Å:- Chain A: A.11, G.12, N.86, K.88, S.89
- Ligands: RSF.8
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:A.11, A:K.88
- Hydrogen bonds: A:N.86
RSF.13: 4 residues within 4Å:- Chain A: I.24, Q.25, Y.40, R.41
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:I.24
- Hydrogen bonds: A:Q.25
RSF.14: 2 residues within 4Å:- Chain A: P.34
- Ligands: RSF.7
No protein-ligand interaction detected (PLIP)- 1 x MG: MAGNESIUM ION(Non-covalent)
- 3 x CA: CALCIUM ION(Non-covalent)
CA.16: 2 residues within 4Å:- Chain A: F.28, D.30
3 PLIP interactions:2 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:F.28, A:D.30, H2O.1
CA.17: 2 residues within 4Å:- Chain A: E.153, D.154
2 PLIP interactions:2 interactions with chain A- Metal complexes: A:E.153, A:D.154
CA.18: 2 residues within 4Å:- Chain A: R.102, D.105
3 PLIP interactions:3 interactions with chain A- Metal complexes: A:R.102, A:D.105, A:D.105
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Buhrman, G. et al., Analysis of Binding Site Hot Spots on the Surface of Ras GTPase. J.Mol.Biol. (2011)
- Release Date
- 2011-09-21
- Peptides
- GTPase HRas: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- monomer
- Ligands
- 1 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER(Non-covalent)
- 13 x RSF: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-ol(Non-covalent)
- 1 x MG: MAGNESIUM ION(Non-covalent)
- 3 x CA: CALCIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Buhrman, G. et al., Analysis of Binding Site Hot Spots on the Surface of Ras GTPase. J.Mol.Biol. (2011)
- Release Date
- 2011-09-21
- Peptides
- GTPase HRas: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A