SMTL ID : 3lfm.1

Crystal structure of the fat mass and obesity associated (FTO) protein reveals basis for its substrate specificity

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x 3DT: 3-methylthymidine(Non-covalent)

3DT.1: 12 residues within 4Å: Chain A: R.86, Y.96, Y.98, L.99, V.218, S.219, H.221, H.222, D.223, E.224, R.312 Ligands: OGA.2 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:Y.98, A:L.99, A:E.224 Hydrogen bonds: A:R.86, A:R.86, A:Y.96, A:Y.98, A:E.224 pi-Cation interactions: A:H.221

1 x OGA: N-OXALYLGLYCINE(Non-covalent)

OGA.2: 14 residues within 4Å: Chain A: R.86, N.195, H.221, D.223, V.234, Y.285, H.297, V.299, R.306, S.308, T.310, R.312 Ligands: 3DT.1, FE2.3 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:N.195, A:H.221, A:Y.285, A:S.308, A:T.310 Salt bridges: A:R.86, A:R.306, A:R.312

1 x FE2: FE (II) ION(Non-covalent)

FE2.3: 4 residues within 4Å: Chain A: H.221, D.223, H.297 Ligands: OGA.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.221, A:D.223, A:H.297

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Han, Z. et al., Crystal structure of the FTO protein reveals basis for its substrate specificity. Nature (2010)

Release Date

2010-04-07

Peptides

Protein fto: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein fto

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