SMTL ID : 4qho.1

Crystal structure of the human fat mass and obesity associated protein (FTO) in complex with CCO10

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.37 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.221, D.223, H.297 Ligands: NKG.2 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.221, A:D.223, A:H.297, H2O.1

1 x NKG: N-{[3-hydroxy-6-(naphthalen-1-yl)pyridin-2-yl]carbonyl}glycine(Non-covalent)

NKG.2: 20 residues within 4Å: Chain A: R.86, Y.96, Y.98, L.99, L.193, N.195, V.218, H.221, H.222, D.223, E.224, V.234, Y.285, H.297, V.299, R.306, S.308, T.310, R.312 Ligands: ZN.1 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:Y.98, A:L.99, A:L.99, A:L.193, A:V.218, A:H.221, A:E.224 Hydrogen bonds: A:N.195, A:Y.285, A:S.308, A:T.310, A:R.312 Water bridges: A:R.312 Salt bridges: A:R.306 pi-Stacking: A:Y.98, A:H.221 pi-Cation interactions: A:R.312

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shishodia, S. et al., Structure-Based Design of Selective Fat Mass and Obesity Associated Protein (FTO) Inhibitors. J.Med.Chem. (2021)

Release Date

2015-06-03

Peptides

Alpha-ketoglutarate-dependent dioxygenase FTO: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Alpha-ketoglutarate-dependent dioxygenase FTO

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