SMTL ID : 4idz.1

Crystal structure of the human fat mass and obesity associated protein (FTO) in complex with N-oxalylglycine (NOG)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.46 Å

Oligo State

monomer

Ligands

1 x OGA: N-OXALYLGLYCINE(Non-covalent)

OGA.1: 14 residues within 4Å: Chain A: R.86, N.195, H.221, D.223, V.234, Y.285, H.297, V.299, R.306, S.308, T.310, R.312 Ligands: GOL.2, NI.3 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:N.195, A:Y.285, A:S.308 Water bridges: A:Y.285 Salt bridges: A:R.86, A:H.221, A:R.306, A:R.312

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 10 residues within 4Å: Chain A: R.86, Y.96, Y.98, H.221, H.222, D.223, E.224, R.312 Ligands: OGA.1, NI.3 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:R.86, A:R.86, A:Y.96, A:H.222, A:E.224, A:R.312, A:R.312

1 x NI: NICKEL (II) ION(Non-covalent)

NI.3: 5 residues within 4Å: Chain A: H.221, D.223, H.297 Ligands: OGA.1, GOL.2 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.221, A:D.223, A:H.297, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Aik, W.S. et al., Structural basis for inhibition of the fat mass and obesity associated protein (FTO). J.Med.Chem. (2013)

Release Date

2013-04-03

Peptides

Alpha-ketoglutarate-dependent dioxygenase FTO: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Alpha-ketoglutarate-dependent dioxygenase FTO

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