SMTL ID : 3m99.1

Structure of the Ubp8-Sgf11-Sgf73-Sus1 SAGA DUB module

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

7 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.4, H.6, C.96, K.98, C.99 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.4, A:H.6, A:C.96, A:C.99 ZN.2: 5 residues within 4Å: Chain A: C.46, C.49, C.68, H.71, H.73 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.46, A:C.49, A:C.68, A:H.73 ZN.3: 4 residues within 4Å: Chain A: C.60, C.63, H.77, H.83 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.60, A:C.63, A:H.77, A:H.83 ZN.4: 4 residues within 4Å: Chain A: H.170, C.174, C.182, C.185 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.170, A:C.174, A:C.182, A:C.185 ZN.5: 4 residues within 4Å: Chain A: H.250, C.271, C.273, H.276 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.250, A:C.271, A:C.273, A:H.276 ZN.6: 4 residues within 4Å: Chain B: C.73, C.76, H.88, C.92 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.73, B:C.76, B:H.88, B:C.92 ZN.7: 4 residues within 4Å: Chain D: C.78, C.81, H.93, C.98 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.78, D:C.81, D:H.93, D:C.98

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kohler, A. et al., Structural basis for assembly and activation of the heterotetrameric SAGA histone H2B deubiquitinase module. Cell(Cambridge,Mass.) (2010)

Release Date

2010-05-05

Peptides

Ubiquitin carboxyl-terminal hydrolase 8: A
SAGA-associated factor 11: B
Protein SUS1: C
SAGA-associated factor 73: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Ubiquitin carboxyl-terminal hydrolase 8

SAGA-associated factor 11

Protein SUS1

SAGA-associated factor 73

Related Entries With Identical Sequence