SMTL ID : 3mgl.1

Crystal structure of permease family protein from Vibrio cholerae

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

homo-octamer

Ligands

44 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 5 residues within 4Å: Chain A: R.55, K.57, S.87, G.88, F.115 Ligand excluded by PLIP IOD.2: 5 residues within 4Å: Chain A: T.16, L.17 Chain E: M.62, R.92, K.96 Ligand excluded by PLIP IOD.3: 2 residues within 4Å: Chain A: P.113, G.117 Ligand excluded by PLIP IOD.4: 2 residues within 4Å: Chain A: R.55 Chain E: F.30 Ligand excluded by PLIP IOD.5: 2 residues within 4Å: Chain A: R.19 Chain E: K.96 Ligand excluded by PLIP IOD.6: 1 residues within 4Å: Chain A: K.104 Ligand excluded by PLIP IOD.7: 6 residues within 4Å: Chain B: F.61, M.62, R.92, K.96 Chain F: T.16, L.17 Ligand excluded by PLIP IOD.8: 2 residues within 4Å: Chain B: P.113, G.117 Ligand excluded by PLIP IOD.9: 2 residues within 4Å: Chain B: R.19 Chain H: K.96 Ligand excluded by PLIP IOD.10: 5 residues within 4Å: Chain B: R.55, K.57, S.87, G.88, F.115 Ligand excluded by PLIP IOD.11: 2 residues within 4Å: Chain B: R.55 Chain H: F.30 Ligand excluded by PLIP IOD.12: 5 residues within 4Å: Chain C: R.55, K.57, S.87, G.88, F.115 Ligand excluded by PLIP IOD.13: 5 residues within 4Å: Chain C: T.16, L.17 Chain G: M.62, R.92, K.96 Ligand excluded by PLIP IOD.14: 2 residues within 4Å: Chain C: P.113, G.117 Ligand excluded by PLIP IOD.15: 2 residues within 4Å: Chain C: R.55 Chain G: F.30 Ligand excluded by PLIP IOD.16: 2 residues within 4Å: Chain C: R.19 Chain G: K.96 Ligand excluded by PLIP IOD.17: 1 residues within 4Å: Chain C: K.104 Ligand excluded by PLIP IOD.18: 6 residues within 4Å: Chain D: F.61, M.62, R.92, K.96 Chain H: T.16, L.17 Ligand excluded by PLIP IOD.19: 2 residues within 4Å: Chain D: P.113, G.117 Ligand excluded by PLIP IOD.20: 2 residues within 4Å: Chain D: R.19 Chain F: K.96 Ligand excluded by PLIP IOD.21: 5 residues within 4Å: Chain D: R.55, K.57, S.87, G.88, F.115 Ligand excluded by PLIP IOD.22: 2 residues within 4Å: Chain D: R.55 Chain F: F.30 Ligand excluded by PLIP IOD.23: 5 residues within 4Å: Chain E: R.55, K.57, S.87, G.88, F.115 Ligand excluded by PLIP IOD.24: 5 residues within 4Å: Chain C: M.62, R.92, K.96 Chain E: T.16, L.17 Ligand excluded by PLIP IOD.25: 2 residues within 4Å: Chain E: P.113, G.117 Ligand excluded by PLIP IOD.26: 2 residues within 4Å: Chain C: F.30 Chain E: R.55 Ligand excluded by PLIP IOD.27: 2 residues within 4Å: Chain C: K.96 Chain E: R.19 Ligand excluded by PLIP IOD.28: 1 residues within 4Å: Chain E: K.104 Ligand excluded by PLIP IOD.29: 6 residues within 4Å: Chain D: T.16, L.17 Chain F: F.61, M.62, R.92, K.96 Ligand excluded by PLIP IOD.30: 2 residues within 4Å: Chain F: P.113, G.117 Ligand excluded by PLIP IOD.31: 2 residues within 4Å: Chain B: K.96 Chain F: R.19 Ligand excluded by PLIP IOD.32: 5 residues within 4Å: Chain F: R.55, K.57, S.87, G.88, F.115 Ligand excluded by PLIP IOD.33: 2 residues within 4Å: Chain B: F.30 Chain F: R.55 Ligand excluded by PLIP IOD.34: 5 residues within 4Å: Chain G: R.55, K.57, S.87, G.88, F.115 Ligand excluded by PLIP IOD.35: 5 residues within 4Å: Chain A: M.62, R.92, K.96 Chain G: T.16, L.17 Ligand excluded by PLIP IOD.36: 2 residues within 4Å: Chain G: P.113, G.117 Ligand excluded by PLIP IOD.37: 2 residues within 4Å: Chain A: F.30 Chain G: R.55 Ligand excluded by PLIP IOD.38: 2 residues within 4Å: Chain A: K.96 Chain G: R.19 Ligand excluded by PLIP IOD.39: 1 residues within 4Å: Chain G: K.104 Ligand excluded by PLIP IOD.40: 6 residues within 4Å: Chain B: T.16, L.17 Chain H: F.61, M.62, R.92, K.96 Ligand excluded by PLIP IOD.41: 2 residues within 4Å: Chain H: P.113, G.117 Ligand excluded by PLIP IOD.42: 2 residues within 4Å: Chain D: K.96 Chain H: R.19 Ligand excluded by PLIP IOD.43: 5 residues within 4Å: Chain H: R.55, K.57, S.87, G.88, F.115 Ligand excluded by PLIP IOD.44: 2 residues within 4Å: Chain D: F.30 Chain H: R.55 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chang, C. et al., Crystal structure of permease family protein from Vibrio cholerae. To be Published

Release Date

2010-04-21

Peptides

Sulfate permease family protein: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

E
A

F
B

G
A

H
B

Sulfate permease family protein

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