SMTL ID : 3mhj.1 (1 other biounit)

Human tankyrase 2 - catalytic PARP domain in complex with 1-methyl-3-(trifluoromethyl)-5h-benzo[c][1,8]naphtyridine-6-one

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.159, H.162, C.167, C.170 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.159, A:H.162, A:C.167, A:C.170

1 x M3F: 1-methyl-3-(trifluoromethyl)benzo[c][1,8]naphthyridin-6(5H)-one(Non-covalent)

M3F.2: 15 residues within 4Å: Chain A: H.109, G.110, S.111, P.112, F.113, I.129, G.130, Y.138, F.139, A.140, K.145, S.146, Y.149, I.153, E.216 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.138, A:Y.138, A:Y.138, A:A.140, A:K.145, A:Y.149, A:Y.149 Hydrogen bonds: A:G.110, A:G.110 pi-Stacking: A:Y.149, A:Y.149

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 5 residues within 4Å: Chain A: R.55, H.57, R.58, K.145, Q.148 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:R.58, A:Q.148 Water bridges: A:R.55, A:N.210 Salt bridges: A:R.55, A:H.57, A:K.145 SO4.4: 4 residues within 4Å: Chain A: N.68, R.69, P.238, E.239 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.68, A:E.239 Water bridges: A:N.68 Salt bridges: A:R.69

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wahlberg, E. et al., Family-wide chemical profiling and structural analysis of PARP and tankyrase inhibitors. Nat.Biotechnol. (2012)

Release Date

2010-05-05

Peptides

Tankyrase-2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tankyrase-2

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