SMTL ID : 5al5.2 (1 other biounit)

Crystal structure of TNKS2 in complex with 2-(4-((pyridin-4-yl)methyl) piperazin-1-yl)-3,4,5,6,7,8-hexahydroquinazolin-4-one

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.159, H.162, C.167, C.170 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.159, A:H.162, A:C.167, A:C.170

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: R.55, H.57, R.58, K.145, Q.148 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:R.58, A:Q.148 Water bridges: A:D.59, A:D.59, A:K.192, A:N.210 Salt bridges: A:R.55, A:H.57, A:K.145 SO4.3: 4 residues within 4Å: Chain A: N.68, R.69, P.238, E.239 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.68, A:E.239, A:E.239 Water bridges: A:N.68 Salt bridges: A:R.69

1 x JL9: 2-(4-((pyridin-4-yl)methyl)piperazin-1-yl)-3,4,5,6,7,8-hexahydroquinazolin-4-one(Non-covalent)

JL9.4: 15 residues within 4Å: Chain A: H.109, G.110, S.111, P.112, F.113, A.127, Y.128, Y.138, F.139, A.140, K.145, S.146, Y.149, I.153, E.216 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.113, A:A.140, A:K.145, A:K.145, A:Y.149, A:I.153 Hydrogen bonds: A:G.110, A:G.110 pi-Stacking: A:Y.149

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nkizinkiko, Y. et al., Discovery of Potent and Selective Nonplanar Tankyrase Inhibiting Nicotinamide Mimics. Bioorg.Med.Chem. (2015)

Release Date

2015-07-29

Peptides

TANKYRASE-2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

TANKYRASE-2

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