SMTL ID : 3muv.1

Crystal Structure of the G20A/C92U mutant c-di-GMP riboswith bound to c-di-AMP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

monomer

Ligands

1 x 2BA: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide(Non-functional Binders)

2BA.1: 9 residues within 4Å: Chain B: G.7, A.9, C.10, A.13, G.14, C.39, A.40, U.86, C.87 No protein-ligand interaction detected (PLIP)

1 x MG: MAGNESIUM ION(Non-functional Binders)

MG.2: 1 residues within 4Å: Chain B: G.12 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Smith, K.D. et al., Structural and biochemical determinants of ligand binding by the c-di-GMP riboswitch . Biochemistry (2010)

Release Date

2010-08-25

Peptides

U1 small nuclear ribonucleoprotein A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
P

U1 small nuclear ribonucleoprotein A

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