SMTL ID : 3n4p.1 (1 other biounit)

Human cytomegalovirus terminase nuclease domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

homo-dimer

Ligands

3 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: D.44, E.223 Chain B: N.52 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Metal complexes: A:D.44, A:D.44, B:N.52 MG.2: 2 residues within 4Å: Chain B: D.68, E.139 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:D.68, B:D.68, B:E.139 MG.3: 3 residues within 4Å: Chain A: N.52 Chain B: D.44, E.223 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Metal complexes: A:N.52, B:D.44

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nadal, M. et al., Structure and inhibition of herpesvirus DNA packaging terminase nuclease domain. Proc.Natl.Acad.Sci.USA (2010)

Release Date

2010-10-06

Peptides

Terminase subunit UL89 protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Terminase subunit UL89 protein

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