3nmu.3 | SWISS-MODEL Template Library

SMTL ID : 3nmu.3 (2 other biounits)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.73 Å

Oligo State

hetero-2-2-2-mer

Ligands

2 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)

SAM.1:	14 residues within 4Å: Chain A: E.358, Y.359 Chain F: K.64, G.88, A.90, E.112, F.113, S.114, G.136, D.137, A.138, D.157, V.158, Q.160 8 PLIP interactions: 5 interactions with chain F, 3 interactions with chain A Hydrogen bonds: F:F.113, F:D.137, F:A.138, F:Q.160, A:E.358, A:Y.359 Salt bridges: F:D.157, A:E.358
SAM.2:	13 residues within 4Å: Chain B: E.358, Y.359 Chain H: K.64, G.88, A.90, I.111, E.112, F.113, G.136, D.137, A.138, D.157, Q.160 8 PLIP interactions: 6 interactions with chain H, 2 interactions with chain B Hydrogen bonds: H:F.113, H:S.114, H:D.137, H:A.138, H:Q.160, B:Y.359 Salt bridges: H:D.157, B:E.358

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Xue, S. et al., Structural basis for substrate placement by an archaeal box C/D ribonucleoprotein particle. Mol.Cell (2010)

Release Date

2011-05-25

Peptides

NOP5/NOP56 related protein: AB
50S ribosomal protein L7Ae: CG
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase: FH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

G
G

F
F

H
J