SMTL ID : 3o3x.1

Crystal structure of gp41-5, a single-chain 5-helix-bundle based on HIV gp41

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

monomer

Ligands

1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.1: 8 residues within 4Å: Chain A: L.20, L.23, T.24, G.27, V.187, I.190, K.191, Q.194 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.20, A:I.190 Hydrogen bonds: A:K.191, A:Q.194

1 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.2: 9 residues within 4Å: Chain A: G.38, G.39, S.40, G.41, G.42, W.43, M.44, E.45, W.46 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:E.45 Hydrogen bonds: A:G.42

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Johnson, L.M. et al., Broad Distribution of Energetically Important Contacts across an Extended Protein Interface. J.Am.Chem.Soc. (2011)

Release Date

2011-07-27

Peptides

gp41-5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

gp41-5

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