SMTL ID : 3oh4.1

Protein structure of USP from L. major bound to URIDINE-5'-DIPHOSPHATE Glucose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.21 Å

Oligo State

monomer

Ligands

1 x UPG: URIDINE-5'-DIPHOSPHATE-GLUCOSE(Non-covalent)

UPG.1: 22 residues within 4Å: Chain A: V.120, A.121, G.122, G.123, M.168, Q.196, P.221, G.223, H.224, Q.270, D.271, I.307, G.308, N.325, E.327, Y.328, S.358, V.359, N.360, Q.407, Y.430, K.434 27 PLIP interactions: 27 interactions with chain A Hydrogen bonds: A:G.122, A:G.123, A:G.123, A:Q.196, A:Q.196, A:G.223, A:H.224, A:Q.270, A:D.271, A:D.271, A:G.308, A:N.325, A:E.327, A:S.358, A:Q.407, A:Y.430, A:K.434 Water bridges: A:R.127, A:R.127, A:D.271, A:E.327, A:E.327 Salt bridges: A:H.224, A:H.224, A:K.434, A:K.434, A:K.434

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 3 residues within 4Å: Chain A: S.478, S.479, Q.480 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.478, A:S.479

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dickmanns, A. et al., Structural basis for the broad substrate range of the UDP-sugar pyrophosphorylase from Leishmania major. J.Mol.Biol. (2011)

Release Date

2010-11-17

Peptides

UDP-sugar pyrophosphorylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

UDP-sugar pyrophosphorylase

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