SMTL ID : 3pcu.1

Crystal structure of human retinoic X receptor alpha ligand-binding domain complexed with LX0278 and SRC1 peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-2-2-mer

Ligands

2 x LX8: 2-[(2S)-6-(2-methylbut-3-en-2-yl)-7-oxo-2,3-dihydro-7H-furo[3,2-g]chromen-2-yl]propan-2-yl acetate(Non-covalent)

LX8.1: 16 residues within 4Å: Chain A: V.37, I.40, A.43, A.44, Q.47, L.81, F.85, R.88, L.98, A.99, V.114, I.117, C.204, H.207, L.208, F.211 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:V.37, A:I.40, A:I.40, A:A.43, A:Q.47, A:L.81, A:F.85, A:L.98, A:L.98, A:A.99, A:V.114, A:V.114, A:H.207, A:F.211 Hydrogen bonds: A:A.99, A:L.208 Water bridges: A:Q.47, A:F.85 Salt bridges: A:R.88 LX8.2: 16 residues within 4Å: Chain C: V.37, I.40, A.43, A.44, Q.47, L.81, F.85, R.88, L.98, A.99, V.114, I.117, C.204, H.207, L.208, F.211 19 PLIP interactions: 19 interactions with chain C Hydrophobic interactions: C:V.37, C:I.40, C:I.40, C:A.43, C:Q.47, C:L.81, C:F.85, C:L.98, C:L.98, C:A.99, C:V.114, C:V.114, C:H.207, C:F.211 Hydrogen bonds: C:A.99, C:L.208 Water bridges: C:Q.47, C:F.85 Salt bridges: C:R.88

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Y. et al., (+)-Rutamarin as a Dual Inducer of Both GLUT4 Translocation and Expression Efficiently Ameliorates Glucose Homeostasis in Insulin-Resistant Mice. Plos One (2012)

Release Date

2011-11-16

Peptides

Retinoic acid receptor RXR-alpha: AC
Nuclear receptor coactivator 2: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
B

D
B

Retinoic acid receptor RXR-alpha

Nuclear receptor coactivator 2

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