SMTL ID : 4iw8.1

Crystal Structure of the Estrogen Receptor alpha Ligand-binding Domain in Complex with Dynamic WAY-derivative, 9a

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.04 Å

Oligo State

hetero-2-2-mer

Ligands

2 x KN3: 4-[1-(3-methylbut-2-en-1-yl)-7-(trifluoromethyl)-1H-indazol-3-yl]benzene-1,3-diol(Non-covalent)

KN3.1: 19 residues within 4Å: Chain A: M.41, L.44, T.45, L.47, A.48, E.51, L.85, M.86, L.89, R.92, L.100, F.102, K.114, M.119, I.122, F.123, L.126, G.219, L.223 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.44, A:L.47, A:A.48, A:L.85, A:L.89, A:F.102, A:K.114, A:F.123, A:L.126 Hydrogen bonds: A:R.92, A:R.92 Water bridges: A:E.51, A:L.85 KN3.2: 21 residues within 4Å: Chain D: M.41, L.44, T.45, L.47, A.48, E.51, W.81, L.82, L.85, M.86, L.89, R.92, F.102, M.119, I.122, L.126, G.219, H.222, L.223, M.226, L.238 18 PLIP interactions: 18 interactions with chain D Hydrophobic interactions: D:L.44, D:T.45, D:A.48, D:L.85, D:L.89, D:L.89, D:F.102, D:I.122, D:L.126, D:L.223, D:L.238 Hydrogen bonds: D:A.48, D:E.51, D:R.92, D:R.92 Water bridges: D:L.89 pi-Stacking: D:F.102 Halogen bonds: D:G.219

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Srinivasan, S. et al., Ligand binding dynamics rewire cellular signaling via Estrogen Receptor-alpha. Nat.Chem.Biol. (2013)

Release Date

2013-03-27

Peptides

Estrogen receptor: AD
Nuclear receptor coactivator 2: BC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D
B

B
C

C
D

Estrogen receptor

Nuclear receptor coactivator 2

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