SMTL ID : 3pso.3 (2 other biounits)

Crystal structure of mouse VPS29 complexed with Zn2+

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

homo-dimer

Ligands

7 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: D.18, H.20, N.49, H.127 Ligands: ZN.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.18, A:H.20, A:H.127 ZN.2: 6 residues within 4Å: Chain A: D.18, N.49, D.72, H.96, H.125 Ligands: ZN.1 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.72, A:D.72, A:H.96, A:H.125 ZN.3: 4 residues within 4Å: Chain A: H.43, D.65, H.67, V.85 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.65, A:D.65, A:H.67 ZN.4: 2 residues within 4Å: Chain A: H.20, C.51 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.20, A:C.51 ZN.5: 5 residues within 4Å: Chain B: D.18, H.20, N.49, H.127 Ligands: ZN.6 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:D.18, B:H.20, B:H.127 ZN.6: 6 residues within 4Å: Chain B: D.18, N.49, D.72, H.96, H.125 Ligands: ZN.5 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:D.72, B:D.72, B:H.96, B:H.125 ZN.7: 4 residues within 4Å: Chain B: H.43, D.65, H.67, V.85 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.43, B:D.65, B:D.65, B:H.67

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Swarbrick, J. et al., Conformational dynamics and biomolecular interactions of VPS29 studied by NMR and X-ray crystallography. To be Published

Release Date

2010-12-15

Peptides

Vacuolar protein sorting-associated protein 29: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Vacuolar protein sorting-associated protein 29

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