SMTL ID : 8tta.2 (1 other biounit)

Structure of retromer VPS29-VPS35 (483-796) complexed with Fam21A repeat 21 (1328-1341)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.46 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 4 residues within 4Å: Chain A: Q.82, L.112, Q.115 Chain B: Q.236 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:Q.82, A:Q.115, B:Q.236 PEG.3: 4 residues within 4Å: Chain B: A.172, S.176, C.217, K.220 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:K.220

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guo, Q. et al., Structural basis for coupling of the WASH subunit FAM21 with the endosomal SNX27-Retromer complex. Proc.Natl.Acad.Sci.USA (2024)

Release Date

2024-08-21

Peptides

Vacuolar protein sorting-associated protein 29: A
Vacuolar protein sorting-associated protein 35: B
SER-ASN-ILE-PHE-ASP-ASP-PRO-LEU-ASN-ALA-PHE-GLY-GLY-GLN: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

C
F

Vacuolar protein sorting-associated protein 29

Vacuolar protein sorting-associated protein 35

SER-ASN-ILE-PHE-ASP-ASP-PRO-LEU-ASN-ALA-PHE-GLY-GLY-GLN

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