SMTL ID : 3q2z.1

Human Squalene synthase in complex with N-[(3R,5S)-7-Chloro-5-(2,3-dimethoxyphenyl)-1-neopentyl-2-oxo-1,2,3,5-tetrahydro-4,1-benzoxazepine-3-acetyl]-L-aspartic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 4 residues within 4Å: Chain A: R.119, H.143, Y.144, L.148 4 PLIP interactions: 4 interactions with chain A Water bridges: A:Y.144, A:Y.144 Salt bridges: A:R.119, A:H.143

1 x D9A: N-{[(3R,5S)-7-chloro-5-(2,3-dimethoxyphenyl)-1-(2,2-dimethylpropyl)-2-oxo-1,2,3,5-tetrahydro-4,1-benzoxazepin-3-yl]acetyl}-L-aspartic acid(Non-covalent)

D9A.2: 19 residues within 4Å: Chain A: S.21, F.24, Y.43, L.46, V.145, A.146, V.149, G.150, L.153, M.177, G.178, L.181, Q.182, N.185, R.188, Y.246, F.258, C.259, P.262 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:F.24, A:Y.43, A:L.46, A:A.146, A:V.149, A:L.181, A:F.258, A:F.258 Hydrogen bonds: A:N.185 Water bridges: A:R.188 Salt bridges: A:R.188

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ichikawa, M. et al., Discovery of a new 2-aminobenzhydrol template for highly potent squalene synthase inhibitors. Bioorg.Med.Chem. (2011)

Release Date

2011-12-21

Peptides

Squalene synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Squalene synthase

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