SMTL ID : 8wtr.1

HUMAN SQUALENE SYNTHASE IN COMPLEX WITH (1S,3R)-3-[2-Chloro-5-(2,2-dimethyl-propyl)-13-(2-methoxy-phenyl)-6,8-dioxo-5,6,7,8,10,11-hexahydro-13H-12-oxa-5,9-diaza-benzocycloundecen-9-yl]-cyclohexanecarboxylic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 4 residues within 4Å: Chain A: R.119, H.143, Y.144, L.148 4 PLIP interactions: 4 interactions with chain A Water bridges: A:Y.144, A:Y.144 Salt bridges: A:R.119, A:H.143

1 x KV3: (1~{S},3~{R})-3-[(10~{S})-13-chloranyl-2-(2,2-dimethylpropyl)-10-(2-methoxyphenyl)-3,5-bis(oxidanylidene)-9-oxa-2,6-diazabicyclo[9.4.0]pentadeca-1(15),11,13-trien-6-yl]cyclohexane-1-carboxylic acid

KV3.2: 14 residues within 4Å: Chain A: F.24, Y.43, L.46, V.145, A.146, V.149, G.150, L.153, G.178, L.181, Q.182, F.258, P.262, M.265 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.24, A:F.24, A:Y.43, A:Y.43, A:L.46, A:A.146, A:V.149, A:L.153, A:F.258, A:F.258

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Haginoya, N. et al., Discovery of Novel 11-Membered Templates as Squalene Synthase Inhibitors. J.Med.Chem. (2024)

Release Date

2024-05-22

Peptides

Squalene synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Squalene synthase

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