SMTL ID : 8wtq.1

HUMAN SQUALENE SYNTHASE IN COMPLEX WITH {1-[2-Chloro-5-(2,2-dimethyl-propyl)-13-(2-methoxy-phenyl)-6-oxo-6,7,10,11-tetrahydro-5H,9H,13H-12-oxa-5,8-diaza-benzocycloundecene-8-carbonyl]-piperidin-4-yl}-acetic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 4 residues within 4Å: Chain A: R.119, H.143, Y.144, L.148 5 PLIP interactions: 5 interactions with chain A Water bridges: A:Y.144, A:Y.144, A:Y.144 Salt bridges: A:R.119, A:H.143

1 x KUO: 2-[1-[[(10~{S})-13-chloranyl-2-(2,2-dimethylpropyl)-10-(2-methoxyphenyl)-3-oxidanylidene-9-oxa-2,5-diazabicyclo[9.4.0]pentadeca-1(15),11,13-trien-5-yl]carbonyl]piperidin-4-yl]ethanoic acid

KUO.2: 16 residues within 4Å: Chain A: S.21, R.22, S.23, F.24, Y.43, L.46, V.145, A.146, V.149, G.150, L.153, G.178, L.181, Q.182, F.258, P.262 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.24, A:Y.43, A:L.46, A:A.146, A:L.153, A:L.181, A:F.258, A:F.258 Hydrogen bonds: A:S.23 Water bridges: A:N.185

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Haginoya, N. et al., Discovery of Novel 11-Membered Templates as Squalene Synthase Inhibitors. J.Med.Chem. (2024)

Release Date

2024-05-22

Peptides

Squalene synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Squalene synthase

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