SMTL ID : 3r4b.1

Crystal Structure of Wild-type HIV-1 Protease in Complex With TMC310911

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

1 x 74T: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl {(2S,3R)-4-[({2-[(1-cyclopentylpiperidin-4-yl)amino]-1,3-benzothiazol-6-yl}sulfonyl)(2-methylpropyl)amino]-3-hydroxy-1-p henylbutan-2-yl}carbamate(Non-covalent)

74T.1: 26 residues within 4Å: Chain A: R.8, L.23, D.25, G.27, A.28, D.29, D.30, V.32, K.45, I.47, G.48, G.49, I.50, P.81, V.82, I.84 Chain B: L.23, D.25, G.27, A.28, D.29, D.30, G.48, G.49, I.50, V.82 21 PLIP interactions: 12 interactions with chain A, 9 interactions with chain B Hydrophobic interactions: A:L.23, A:A.28, A:V.32, A:I.47, A:P.81, A:V.82, A:I.84, B:L.23, B:V.82 Hydrogen bonds: A:D.29, A:D.30, A:D.30, B:D.25, B:G.27, B:G.27, B:D.29, B:D.30 Water bridges: A:I.50, B:I.50 Salt bridges: A:D.25, B:D.25

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 1 residues within 4Å: Chain A: G.16 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.16 Water bridges: A:P.63

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dierynck, I. et al., TMC310911, a Novel Human Immunodeficiency Virus Type 1 Protease Inhibitor, Shows In Vitro an Improved Resistance Profile and Higher Genetic Barrier to Resistance Compared with Current Protease Inhibitors. Antimicrob.Agents Chemother. (2011)

Release Date

2011-09-21

Peptides

HIV-1 protease: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HIV-1 protease

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