SMTL ID : 3ro4.1

X-ray Structure of Ketohexokinase in complex with an indazole compound derivative

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: R.123, E.188, T.268, G.270, A.271, G.272, D.273 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:E.188, A:G.270, A:A.271, A:G.272, A:D.273 Salt bridges: A:R.123 SO4.3: 6 residues within 4Å: Chain A: R.46 Chain B: L.26, L.127, H.128, R.156, K.189 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Salt bridges: B:H.128, B:R.156, B:K.189, A:R.46

1 x LJ9: 3-ethyl-6-[(3aR,6aS)-hexahydropyrrolo[3,4-c]pyrrol-2(1H)-yl]-1-phenyl-1H-indazole(Non-covalent)

LJ9.2: 15 residues within 4Å: Chain A: N.122, R.123, A.241, E.242, G.244, A.259, P.261, V.265, T.268, A.271, F.275, C.297, A.300, C.304 Chain B: D.42 10 PLIP interactions: 9 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:A.241, A:E.242, A:A.259, A:P.261, A:V.265, A:A.271, A:F.275, A:A.300 Hydrogen bonds: A:T.268, B:D.42

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, X. et al., Optimization of a pyrazole hit from FBDD into a novel series of indazoles as ketohexokinase inhibitors. Bioorg.Med.Chem.Lett. (2011)

Release Date

2011-08-03

Peptides

Ketohexokinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Ketohexokinase

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