SMTL ID : 3s92.1

Crystal Structure of the second bromodomain of human BRD3 in complex with the inhibitor JQ1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.36 Å

Oligo State

monomer

Ligands

1 x JQ1: (6S)-6-(2-tert-butoxy-2-oxoethyl)-4-(4-chlorophenyl)-2,3,9-trimethyl-6,7-dihydrothieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-10-ium(Non-covalent)

JQ1.1: 12 residues within 4Å: Chain A: W.29, P.30, F.31, V.35, L.40, L.42, C.84, N.88, H.92, E.93, V.94, M.97 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:W.29, A:W.29, A:W.29, A:P.30, A:F.31, A:V.35, A:L.40, A:L.42, A:L.42, A:V.94, A:V.94 Hydrogen bonds: A:N.88, A:N.88 Water bridges: A:V.94 Salt bridges: A:H.92

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 2 residues within 4Å: Chain A: Q.102, D.103 2 PLIP interactions: 2 interactions with chain A Water bridges: A:Y.85, A:R.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Filippakopoulos, P. et al., Crystal Structure of the second bromodomain of human BRD3 in complex with the inhibitor JQ1. To be Published

Release Date

2011-06-29

Peptides

Bromodomain-containing protein 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 3

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