- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- monomer
- Ligands
- 1 x 0BW: methyl 3-[(3-methoxybenzoyl)amino]-4-(4-methylpiperazin-1-yl)benzoate(Non-covalent)
- 6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.2: 4 residues within 4Å:- Chain A: D.76, N.78, L.79, D.93
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:D.76, A:N.78, A:D.93
- Water bridges: A:S.74, A:D.93
EDO.3: 6 residues within 4Å:- Chain A: Y.206, L.218, L.227, K.228, L.266, Q.267
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:Q.267
- Water bridges: A:K.228, A:Q.267
EDO.4: 4 residues within 4Å:- Chain A: G.249, K.250, W.251
- Ligands: UNX.22
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:K.250
EDO.5: 4 residues within 4Å:- Chain A: Y.169, L.212, E.236, K.237
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Y.169, A:K.237
EDO.6: 4 residues within 4Å:- Chain A: L.121, K.143, T.178, A.179
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:K.143
EDO.7: 2 residues within 4Å:- Chain A: D.150, Y.169
2 PLIP interactions:2 interactions with chain A- Water bridges: A:Y.169, A:D.170
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 1 x SO4: SULFATE ION(Non-functional Binders)
- 12 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)
UNX.11: 1 residues within 4Å:- Chain A: R.132
No protein-ligand interaction detected (PLIP)UNX.12: 1 residues within 4Å:- Chain A: S.95
No protein-ligand interaction detected (PLIP)UNX.13: 1 residues within 4Å:- Chain A: E.300
No protein-ligand interaction detected (PLIP)UNX.14: 3 residues within 4Å:- Chain A: K.234, E.236
- Ligands: UNX.17
No protein-ligand interaction detected (PLIP)UNX.15: 2 residues within 4Å:- Chain A: L.100, K.101
No protein-ligand interaction detected (PLIP)UNX.16: 1 residues within 4Å:- Chain A: I.271
No protein-ligand interaction detected (PLIP)UNX.17: 2 residues within 4Å:- Chain A: E.236
- Ligands: UNX.14
No protein-ligand interaction detected (PLIP)UNX.18: 2 residues within 4Å:- Chain A: R.174, C.183
No protein-ligand interaction detected (PLIP)UNX.19: 1 residues within 4Å:- Chain A: Q.118
No protein-ligand interaction detected (PLIP)UNX.20: 5 residues within 4Å:- Chain A: W.37, I.49, E.58, K.59, V.94
No protein-ligand interaction detected (PLIP)UNX.21: 3 residues within 4Å:- Chain A: S.201, P.202, N.203
No protein-ligand interaction detected (PLIP)UNX.22: 3 residues within 4Å:- Chain A: G.248, G.249
- Ligands: EDO.4
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Senisterra, G. et al., Small-molecule inhibition of MLL activity by disruption of its interaction with WDR5. Biochem. J. (2013)
- Release Date
- 2011-12-14
- Peptides
- WD repeat-containing protein 5: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- monomer
- Ligands
- 1 x 0BW: methyl 3-[(3-methoxybenzoyl)amino]-4-(4-methylpiperazin-1-yl)benzoate(Non-covalent)
- 6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 1 x SO4: SULFATE ION(Non-functional Binders)
- 12 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Senisterra, G. et al., Small-molecule inhibition of MLL activity by disruption of its interaction with WDR5. Biochem. J. (2013)
- Release Date
- 2011-12-14
- Peptides
- WD repeat-containing protein 5: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
B