- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.57 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CU: COPPER (II) ION(Non-covalent)
- 4 x NA: SODIUM ION(Non-functional Binders)
NA.2: 6 residues within 4Å:- Chain A: R.41, D.432, M.433, F.438, D.573, I.574
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:R.41, A:I.574, A:I.574
NA.4: 4 residues within 4Å:- Chain A: A.85, A.86, R.140, S.554
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:R.140, A:S.554, A:S.554
- Water bridges: A:S.554
NA.12: 6 residues within 4Å:- Chain B: R.41, D.432, M.433, F.438, D.573, I.574
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:R.41, B:D.432, B:D.573, B:I.574
NA.14: 4 residues within 4Å:- Chain B: A.85, A.86, R.140, S.554
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:R.140, B:S.554, B:S.554
- Water bridges: B:S.554
- 2 x PEL: 2-PHENYL-ETHANOL(Non-covalent)
PEL.3: 10 residues within 4Å:- Chain A: A.127, P.128, L.129, W.160, Y.288, D.290, Y.294, I.371, G.372, N.373
8 PLIP interactions:8 interactions with chain A- Hydrophobic interactions: A:A.127, A:P.128, A:L.129, A:W.160, A:Y.288, A:Y.294, A:Y.294
- Hydrogen bonds: A:D.290
PEL.13: 10 residues within 4Å:- Chain B: A.127, P.128, L.129, W.160, Y.288, D.290, Y.294, I.371, G.372, N.373
8 PLIP interactions:8 interactions with chain B- Hydrophobic interactions: B:A.127, B:P.128, B:L.129, B:W.160, B:Y.288, B:Y.294, B:Y.294
- Hydrogen bonds: B:D.290
- 12 x GOL: GLYCEROL(Non-functional Binders)
GOL.5: 6 residues within 4Å:- Chain A: R.449, R.482
- Chain B: T.513, L.514, L.515, T.530
10 PLIP interactions:5 interactions with chain B, 5 interactions with chain A- Hydrogen bonds: B:T.513, B:T.513, B:T.530, B:K.531
- Water bridges: B:T.513, A:R.449, A:R.449, A:R.449, A:R.482, A:R.482
GOL.6: 9 residues within 4Å:- Chain A: D.340, W.341, G.342
- Chain B: E.339, W.341, R.362, E.391, K.393
- Ligands: GOL.20
8 PLIP interactions:5 interactions with chain B, 3 interactions with chain A- Hydrogen bonds: B:E.339, B:R.362, B:E.391, B:K.393
- Water bridges: B:Y.381, A:D.340, A:D.340, A:D.340
GOL.7: 7 residues within 4Å:- Chain A: H.507, K.602, R.604
- Chain B: Q.511, L.582, D.597, T.598
8 PLIP interactions:5 interactions with chain B, 3 interactions with chain A- Water bridges: B:T.583, B:D.597, B:D.597, B:T.598, B:T.598, A:H.507, A:R.604
- Hydrogen bonds: A:R.604
GOL.8: 7 residues within 4Å:- Chain B: L.119, V.151, D.153, H.162, V.189, P.190, A.191
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:D.153, B:A.191
- Water bridges: B:D.153
GOL.9: 11 residues within 4Å:- Chain A: I.31, A.32, Y.33, L.34, V.243, L.295, Q.298, I.320, S.321, D.322, A.323
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:L.34, A:S.321, A:S.321
- Water bridges: A:Q.298, A:Q.298
GOL.10: 9 residues within 4Å:- Chain A: W.341, R.362, Y.381, Y.383, E.389, E.391
- Chain B: W.341
- Ligands: GOL.16, GOL.20
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:R.362, A:E.389
- Water bridges: A:E.389, A:E.391
GOL.15: 6 residues within 4Å:- Chain A: T.513, L.514, L.515, T.530
- Chain B: R.449, R.482
9 PLIP interactions:4 interactions with chain A, 5 interactions with chain B- Hydrogen bonds: A:T.513, A:T.530, A:K.531
- Water bridges: A:T.513, B:R.449, B:R.449, B:R.449, B:R.482, B:R.482
GOL.16: 9 residues within 4Å:- Chain A: E.339, W.341, R.362, E.391, K.393
- Chain B: D.340, W.341, G.342
- Ligands: GOL.10
7 PLIP interactions:6 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:E.339, A:R.362, A:E.391, A:K.393
- Water bridges: A:E.339, A:E.339, B:D.340
GOL.17: 7 residues within 4Å:- Chain A: Q.511, L.582, D.597, T.598
- Chain B: H.507, K.602, R.604
8 PLIP interactions:5 interactions with chain A, 3 interactions with chain B- Water bridges: A:T.583, A:D.597, A:D.597, A:D.597, A:T.598, B:H.507, B:R.604
- Hydrogen bonds: B:R.604
GOL.18: 7 residues within 4Å:- Chain A: L.119, V.151, D.153, H.162, V.189, P.190, A.191
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:D.153, A:A.191
GOL.19: 11 residues within 4Å:- Chain B: I.31, A.32, Y.33, L.34, V.243, L.295, Q.298, I.320, S.321, D.322, A.323
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:L.34, B:S.321, B:S.321
- Water bridges: B:Q.298, B:Q.298
GOL.20: 9 residues within 4Å:- Chain A: W.341
- Chain B: W.341, R.362, Y.381, Y.383, E.389, E.391
- Ligands: GOL.6, GOL.10
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:R.362, B:Y.383, B:E.389
- Water bridges: B:E.391
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Murakawa, T. et al., Probing the Catalytic Mechanism of Copper Amine Oxidase from Arthrobacter globiformis with Halide Ions. J.Biol.Chem. (2015)
- Release Date
- 2015-08-19
- Peptides
- Phenylethylamine oxidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
SMTL ID : 3x3x.1 (1 other biounit)
Copper amine oxidase from Arthrobacter globiformis anaerobically reduced by phenylethylamine
Phenylethylamine oxidase
Toggle Identical (AB)Related Entries With Identical Sequence
3x3x.2 | 3x3y.1 | 3x3z.1 | 3x40.1 | 3x40.2 | 3x41.1 | 5zou.1 | 5zow.1 | 5zox.1 | 5zox.2 | 5zoy.1 | 5zoy.2 | 5zoz.1 | 5zoz.2 | 5zp0.1 | 5zp0.2 | 5zp1.1 | 5zp1.2 | 5zp2.1 | 5zp2.2 | 5zp3.1 | 5zp3.2 | 5zp4.1 | 5zp4.2 | 5zp5.1 | 5zp5.2 | 5zp6.1 | 5zp6.2 | 5zp7.1 | 5zp8.1 more...less...5zp9.1 | 5zpa.1 | 5zpb.1 | 5zpc.1 | 5zpd.1 | 5zpe.1 | 5zpf.1 | 5zpg.1 | 5zph.1 | 5zpi.1 | 5zpj.1 | 5zpj.2 | 5zpk.1 | 5zpk.2 | 5zpl.1 | 5zpl.2 | 5zpm.1 | 5zpm.2 | 5zpn.1 | 5zpn.2 | 5zpo.1 | 5zpo.2 | 5zpp.1 | 5zpp.2 | 5zpq.1 | 5zpq.2 | 5zpr.1 | 5zpr.2 | 5zps.1 | 5zps.2 | 5zpt.1 | 5zpt.2 | 7ynh.1 | 7ynh.2