- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.87 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CU: COPPER (II) ION(Non-covalent)
- 8 x BR: BROMIDE ION(Non-covalent)
BR.2: 7 residues within 4Å:- Chain A: Y.374, V.398, H.423, H.425, H.584, M.594
- Ligands: CU.1
Ligand excluded by PLIPBR.3: 3 residues within 4Å:- Chain A: H.337, S.366, Y.379
Ligand excluded by PLIPBR.4: 3 residues within 4Å:- Chain A: G.26, P.27, E.28
Ligand excluded by PLIPBR.16: 6 residues within 4Å:- Chain B: Y.374, H.423, H.425, H.584, M.594
- Ligands: CU.15
Ligand excluded by PLIPBR.17: 4 residues within 4Å:- Chain B: S.521, R.524, S.554, G.555
Ligand excluded by PLIPBR.18: 3 residues within 4Å:- Chain B: H.337, S.366, Y.379
Ligand excluded by PLIPBR.19: 2 residues within 4Å:- Chain B: L.119, D.120
Ligand excluded by PLIPBR.20: 3 residues within 4Å:- Chain B: G.26, P.27, E.28
Ligand excluded by PLIP- 2 x NA: SODIUM ION(Non-functional Binders)
NA.5: 6 residues within 4Å:- Chain A: R.41, D.432, M.433, F.438, D.573, I.574
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:R.41, A:D.573, A:D.573, A:I.574
NA.21: 6 residues within 4Å:- Chain B: R.41, D.432, M.433, F.438, D.573, I.574
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:R.41, B:I.574, B:I.574
- 2 x K: POTASSIUM ION(Non-covalent)
K.6: 2 residues within 4Å:- Chain A: V.71, T.72
2 PLIP interactions:1 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:V.71, H2O.15
K.22: 2 residues within 4Å:- Chain B: V.71, T.72
3 PLIP interactions:1 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:V.71, H2O.27, H2O.42
- 17 x GOL: GLYCEROL(Non-functional Binders)
GOL.7: 5 residues within 4Å:- Chain A: T.513, L.514, L.515, T.530
- Chain B: R.449
Ligand excluded by PLIPGOL.8: 7 residues within 4Å:- Chain A: E.339, W.341, R.362, K.393
- Chain B: D.340, W.341
- Ligands: GOL.11
Ligand excluded by PLIPGOL.9: 7 residues within 4Å:- Chain A: W.341, N.360, Y.383, D.385, T.387, E.389, K.602
Ligand excluded by PLIPGOL.10: 10 residues within 4Å:- Chain A: I.31, A.32, Y.33, L.34, V.243, Q.298, I.320, S.321, D.322, A.323
Ligand excluded by PLIPGOL.11: 7 residues within 4Å:- Chain A: W.341, R.362, Y.381, E.389, E.391
- Ligands: GOL.8, GOL.28
Ligand excluded by PLIPGOL.12: 5 residues within 4Å:- Chain A: Q.511, D.597
- Chain B: H.507, K.602, R.604
Ligand excluded by PLIPGOL.13: 7 residues within 4Å:- Chain A: E.94, F.97, Y.299, T.370, I.371, G.372
- Chain B: L.350
Ligand excluded by PLIPGOL.14: 10 residues within 4Å:- Chain A: A.7, L.34, G.35, V.36, F.52, F.241, D.242, V.243, V.319, I.320
Ligand excluded by PLIPGOL.23: 11 residues within 4Å:- Chain B: R.524, R.525, P.545, T.546, F.549, V.550, H.553, S.554, G.555, G.556, A.557
Ligand excluded by PLIPGOL.24: 6 residues within 4Å:- Chain A: R.449, R.482
- Chain B: T.513, L.514, T.530, K.531
Ligand excluded by PLIPGOL.25: 7 residues within 4Å:- Chain B: E.339, W.341, R.362, Y.381, E.391, K.393
- Ligands: GOL.28
Ligand excluded by PLIPGOL.26: 4 residues within 4Å:- Chain B: V.151, D.153, V.189, A.191
Ligand excluded by PLIPGOL.27: 6 residues within 4Å:- Chain A: H.507, K.602, R.604
- Chain B: L.582, D.597, T.598
Ligand excluded by PLIPGOL.28: 8 residues within 4Å:- Chain B: W.341, R.362, Y.381, Y.383, E.389, E.391
- Ligands: GOL.11, GOL.25
Ligand excluded by PLIPGOL.29: 6 residues within 4Å:- Chain A: L.350
- Chain B: E.94, F.97, Y.299, T.370, G.372
Ligand excluded by PLIPGOL.30: 9 residues within 4Å:- Chain B: I.31, A.32, Y.33, L.34, V.243, Q.298, I.320, S.321, D.322
Ligand excluded by PLIPGOL.31: 7 residues within 4Å:- Chain B: L.34, G.35, V.36, F.241, D.242, V.243, V.319
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Murakawa, T. et al., Probing the Catalytic Mechanism of Copper Amine Oxidase from Arthrobacter globiformis with Halide Ions. J.Biol.Chem. (2015)
- Release Date
- 2015-08-19
- Peptides
- Phenylethylamine oxidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
SMTL ID : 3x41.1
Copper amine oxidase from Arthrobacter globiformis: Product Schiff-base form produced by anaerobic reduction in the presence of sodium bromide
Phenylethylamine oxidase
Toggle Identical (AB)Related Entries With Identical Sequence
3x3x.1 | 3x3x.2 | 3x3y.1 | 3x3z.1 | 3x40.1 | 3x40.2 | 5zou.1 | 5zow.1 | 5zox.1 | 5zox.2 | 5zoy.1 | 5zoy.2 | 5zoz.1 | 5zoz.2 | 5zp0.1 | 5zp0.2 | 5zp1.1 | 5zp1.2 | 5zp2.1 | 5zp2.2 | 5zp3.1 | 5zp3.2 | 5zp4.1 | 5zp4.2 | 5zp5.1 | 5zp5.2 | 5zp6.1 | 5zp6.2 | 5zp7.1 | 5zp8.1 more...less...5zp9.1 | 5zpa.1 | 5zpb.1 | 5zpc.1 | 5zpd.1 | 5zpe.1 | 5zpf.1 | 5zpg.1 | 5zph.1 | 5zpi.1 | 5zpj.1 | 5zpj.2 | 5zpk.1 | 5zpk.2 | 5zpl.1 | 5zpl.2 | 5zpm.1 | 5zpm.2 | 5zpn.1 | 5zpn.2 | 5zpo.1 | 5zpo.2 | 5zpp.1 | 5zpp.2 | 5zpq.1 | 5zpq.2 | 5zpr.1 | 5zpr.2 | 5zps.1 | 5zps.2 | 5zpt.1 | 5zpt.2 | 7ynh.1 | 7ynh.2