- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.83 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x N85: N-[(1H-indol-2-ylcarbonyl)carbamoyl]-beta-D-glucopyranosylamine(Non-covalent)
- 2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)
PLP.3: 14 residues within 4Å:- Chain A: G.135, G.136, W.492, V.568, K.569, K.575, Y.649, R.650, V.651, A.654, G.676, T.677, G.678, K.681
14 PLIP interactions:14 interactions with chain A- Hydrophobic interactions: A:Y.649, A:V.651, A:K.681
- Hydrogen bonds: A:T.677, A:G.678, A:K.681
- Water bridges: A:G.136, A:K.569, A:K.569, A:K.575, A:K.575, A:N.679
- Salt bridges: A:K.569, A:K.575
PLP.7: 14 residues within 4Å:- Chain B: G.135, G.136, W.492, V.568, K.569, K.575, Y.649, R.650, V.651, A.654, G.676, T.677, G.678, K.681
15 PLIP interactions:15 interactions with chain B- Hydrophobic interactions: B:Y.649, B:V.651, B:K.681
- Hydrogen bonds: B:Y.649, B:T.677, B:G.678, B:K.681
- Water bridges: B:G.136, B:K.569, B:K.569, B:K.575, B:K.575, B:N.679
- Salt bridges: B:K.569, B:K.575
- 2 x SO4: SULFATE ION(Non-functional Binders)
SO4.4: 7 residues within 4Å:- Chain A: D.284, T.379, L.381, A.384, H.572, Y.574
- Ligands: N85.2
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:D.284, A:H.378
- Water bridges: A:T.379, A:T.379, A:Y.574, A:E.673
- Salt bridges: A:H.572
SO4.8: 7 residues within 4Å:- Chain B: D.284, T.379, L.381, A.384, H.572, Y.574
- Ligands: N85.6
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:D.284, B:H.378, B:T.379, B:Y.574
- Salt bridges: B:H.572
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Chrysina, E.D. et al., Synthesis, Kinetic, Computational and Crystallographic Evaluation of N-Acyl-N-Beta-D- Glucopyranosyl)Ureas, Nanomolar Glucose Analogue Inhibitors of Glycogen Phosphorylase, Potential Antidiabetic Agents. To be Published
- Release Date
- 2013-12-11
- Peptides
- GLYCOGEN PHOSPHORYLASE, MUSCLE FORM: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.83 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x N85: N-[(1H-indol-2-ylcarbonyl)carbamoyl]-beta-D-glucopyranosylamine(Non-covalent)
- 2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)
- 2 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Chrysina, E.D. et al., Synthesis, Kinetic, Computational and Crystallographic Evaluation of N-Acyl-N-Beta-D- Glucopyranosyl)Ureas, Nanomolar Glucose Analogue Inhibitors of Glycogen Phosphorylase, Potential Antidiabetic Agents. To be Published
- Release Date
- 2013-12-11
- Peptides
- GLYCOGEN PHOSPHORYLASE, MUSCLE FORM: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A