SMTL ID : 4aca.2 (3 other biounits)

CRYSTAL STRUCTURE OF TRANSLATION ELONGATION FACTOR SELB FROM METHANOCOCCUS MARIPALUDIS, APO FORM

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.15 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: R.88, R.276 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.88, A:R.276 SO4.2: 3 residues within 4Å: Chain A: K.211, G.212, D.270 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.212

1 x DXC: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID(Non-covalent)

DXC.3: 12 residues within 4Å: Chain A: I.61, D.62, I.63, G.64, F.65, S.66, F.208, V.216, T.218, Q.247, G.263, M.264 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:I.63, A:F.65, A:F.65, A:F.208, A:V.216, A:V.216, A:T.218, A:Q.247 Hydrogen bonds: A:D.62, A:I.63, A:G.64, A:F.65, A:Q.247

1 x 5GP: GUANOSINE-5'-MONOPHOSPHATE(Non-covalent)

5GP.4: 9 residues within 4Å: Chain A: P.110, K.111, T.112, M.118, L.119, I.153, T.157, I.302, L.382 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:P.110, A:P.110, A:T.112

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Leibundgut, M. et al., Selenocysteine tRNA-Specific Elongation Factor Selb is a Structural Chimaera of Elongation and Initiation Factors. Embo J. (2005)

Release Date

2012-11-07

Peptides

TRANSLATION ELONGATION FACTOR SELB: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

TRANSLATION ELONGATION FACTOR SELB

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