SMTL ID : 4bpd.1 (1 other biounit)

Structure determination of an integral membrane kinase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

homo-trimer

Ligands

3 x 78M: (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE(Non-covalent)

78M.1: 12 residues within 4Å: Chain A: W.27, L.30, R.31, W.34, I.35, V.47, L.48, V.51, M.72, M.75 Chain B: I.112 Ligands: 78M.2 7 PLIP interactions: 6 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:L.30, A:W.34, A:W.34, A:V.47, A:L.48, A:V.51, B:I.112 78M.2: 4 residues within 4Å: Chain A: W.27, R.31, V.52 Ligands: 78M.1 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:W.27, A:V.52 Hydrogen bonds: A:R.31 78M.3: 6 residues within 4Å: Chain B: A.55, R.64 Chain C: A.122, I.123, W.126, S.127 5 PLIP interactions: 4 interactions with chain C, 1 interactions with chain B Hydrophobic interactions: C:I.123, C:W.126, C:W.126 Hydrogen bonds: C:I.123 Salt bridges: B:R.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Boland, C. et al., Cell-Free Expression and in Meso Crystallisation of an Integral Membrane Kinase for Structure Determination. Cell.Mol.Life Sci. (2014)

Release Date

2014-05-07

Peptides

DIACYLGLYCEROL KINASE: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Membrane

We predict this structure to be a membrane protein.
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DIACYLGLYCEROL KINASE

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