SMTL ID : 4brr.2 (1 other biounit)

Crystal structure of the integral membrane diacylglycerol kinase - delta 7.79

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.44 Å

Oligo State

homo-trimer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: E.37, E.85 Ligands: ACT.2, FLC.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.37, A:E.37, A:E.85, A:E.85

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 6 residues within 4Å: Chain A: E.37, A.39, E.78, N.81, E.85 Ligands: ZN.1 No protein-ligand interaction detected (PLIP)

1 x FLC: CITRATE ANION(Non-covalent)

FLC.3: 3 residues within 4Å: Chain A: E.37, E.85 Ligands: ZN.1 No protein-ligand interaction detected (PLIP)

1 x 79M: (2R)-2,3-dihydroxypropyl (7Z)-hexadec-7-enoate(Non-covalent)

79M.4: 4 residues within 4Å: Chain A: W.56, L.57, D.58, F.129 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:W.56, A:F.129 Hydrogen bonds: A:D.58

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, D. et al., Crystal Structure of an Integral Membrane Enzyme Determined by X-Ray Free Electron Laser Femtocrystallography. To be Published

Release Date

2014-06-18

Peptides

DIACYLGLYCEROL KINASE: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

C
F

Membrane

We predict this structure to be a membrane protein.
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DIACYLGLYCEROL KINASE

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