SMTL ID : 4bqw.1

HIF prolyl hydroxylase 2 (PHD2/ EGLN1) in complex with Mn(II) and 2-(4-hydroxy-2-oxo-1,2-dihydroquinoline-3-carboxamido)acetic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.79 Å

Oligo State

monomer

Ligands

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain A: H.139, D.141, H.200 Ligands: QNM.2 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.139, A:D.141, A:H.200, H2O.5

1 x QNM: 2-[(1-methyl-2-oxidanyl-4-oxidanylidene-quinolin-3-yl)carbonylamino]ethanoic acid(Non-covalent)

QNM.2: 15 residues within 4Å: Chain A: D.80, I.82, M.125, A.127, Y.129, Y.136, H.139, D.141, I.153, Y.155, L.169, H.200, V.202, R.209 Ligands: MN.1 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:Y.136 Hydrogen bonds: A:Y.129 Water bridges: A:R.209, A:R.209 Salt bridges: A:R.209 pi-Stacking: A:Y.136

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chowdhury, R. et al., Selective small molecule probes for the hypoxia inducible factor (HIF) prolyl hydroxylases. ACS Chem. Biol. (2013)

Release Date

2013-06-19

Peptides

EGL NINE HOMOLOG 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

EGL NINE HOMOLOG 1

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