- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x CL: CHLORIDE ION(Non-functional Binders)
- 3 x GOL: GLYCEROL(Non-functional Binders)
GOL.3: 9 residues within 4Å:- Chain A: I.24, V.25, Y.26, G.27, H.28, F.29, L.261, S.264, L.265
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:V.25, A:H.28, A:F.29, A:S.264, A:S.264
- Water bridges: A:S.264, A:Y.268
GOL.13: 9 residues within 4Å:- Chain B: I.24, V.25, Y.26, G.27, H.28, F.29, L.261, S.264, L.265
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:V.25, B:H.28, B:F.29, B:S.264, B:S.264
- Water bridges: B:S.264, B:Y.268
GOL.23: 9 residues within 4Å:- Chain C: I.24, V.25, Y.26, G.27, H.28, F.29, L.261, S.264, L.265
7 PLIP interactions:7 interactions with chain C- Hydrogen bonds: C:V.25, C:H.28, C:F.29, C:S.264, C:S.264
- Water bridges: C:S.264, C:Y.268
- 3 x POP: PYROPHOSPHATE 2-(Non-covalent)
POP.4: 10 residues within 4Å:- Chain A: D.47, I.48, S.49, G.50, F.51, T.52, D.99, K.144, N.412
- Ligands: MG.9
9 PLIP interactions:9 interactions with chain A- Hydrogen bonds: A:G.50, A:F.51, A:T.52, A:T.52, A:N.412
- Water bridges: A:T.52, A:A.53, A:D.99
- Salt bridges: A:K.144
POP.14: 10 residues within 4Å:- Chain B: D.47, I.48, S.49, G.50, F.51, T.52, D.99, K.144, N.412
- Ligands: MG.19
9 PLIP interactions:9 interactions with chain B- Hydrogen bonds: B:G.50, B:F.51, B:T.52, B:T.52, B:N.412
- Water bridges: B:T.52, B:A.53, B:D.99
- Salt bridges: B:K.144
POP.24: 10 residues within 4Å:- Chain C: D.47, I.48, S.49, G.50, F.51, T.52, D.99, K.144, N.412
- Ligands: MG.29
9 PLIP interactions:9 interactions with chain C- Hydrogen bonds: C:G.50, C:F.51, C:T.52, C:T.52, C:N.412
- Water bridges: C:T.52, C:A.53, C:D.99
- Salt bridges: C:K.144
- 12 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.5: 4 residues within 4Å:- Chain A: T.322, L.325, Q.331, I.332
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:T.322, A:T.322, A:I.332
EDO.6: 5 residues within 4Å:- Chain A: F.29, P.31, R.33, S.264, K.267
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:F.29, A:S.264, A:K.267, A:K.267
- Water bridges: A:R.33, A:S.163
EDO.7: 7 residues within 4Å:- Chain A: F.58, S.59, Y.63, D.65, R.66, G.67, L.289
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:D.65, A:G.67
- Water bridges: A:S.59, A:S.60
EDO.8: 5 residues within 4Å:- Chain A: V.355, P.356, D.357, E.358, L.359
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:V.355, A:D.357, A:E.358, A:L.359
- Water bridges: A:D.357, A:T.360
EDO.15: 4 residues within 4Å:- Chain B: T.322, L.325, Q.331, I.332
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:T.322, B:T.322, B:I.332
EDO.16: 5 residues within 4Å:- Chain B: F.29, P.31, R.33, S.264, K.267
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:F.29, B:S.264, B:K.267, B:K.267
- Water bridges: B:R.33, B:S.163
EDO.17: 7 residues within 4Å:- Chain B: F.58, S.59, Y.63, D.65, R.66, G.67, L.289
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:D.65, B:G.67
- Water bridges: B:S.59, B:S.60
EDO.18: 5 residues within 4Å:- Chain B: V.355, P.356, D.357, E.358, L.359
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:V.355, B:D.357, B:E.358, B:L.359
- Water bridges: B:D.357, B:T.360
EDO.25: 4 residues within 4Å:- Chain C: T.322, L.325, Q.331, I.332
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:T.322, C:T.322, C:I.332
EDO.26: 5 residues within 4Å:- Chain C: F.29, P.31, R.33, S.264, K.267
6 PLIP interactions:6 interactions with chain C- Hydrogen bonds: C:F.29, C:S.264, C:K.267, C:K.267
- Water bridges: C:R.33, C:S.163
EDO.27: 7 residues within 4Å:- Chain C: F.58, S.59, Y.63, D.65, R.66, G.67, L.289
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:D.65, C:G.67
- Water bridges: C:S.59, C:S.60
EDO.28: 5 residues within 4Å:- Chain C: V.355, P.356, D.357, E.358, L.359
6 PLIP interactions:6 interactions with chain C- Hydrogen bonds: C:V.355, C:D.357, C:E.358, C:L.359
- Water bridges: C:D.357, C:T.360
- 3 x MG: MAGNESIUM ION(Non-covalent)
MG.9: 3 residues within 4Å:- Chain A: D.47, D.99
- Ligands: POP.4
2 PLIP interactions:2 interactions with chain A- Metal complexes: A:D.47, A:D.99
MG.19: 3 residues within 4Å:- Chain B: D.47, D.99
- Ligands: POP.14
2 PLIP interactions:2 interactions with chain B- Metal complexes: B:D.47, B:D.99
MG.29: 3 residues within 4Å:- Chain C: D.47, D.99
- Ligands: POP.24
2 PLIP interactions:2 interactions with chain C- Metal complexes: C:D.47, C:D.99
- 3 x ACT: ACETATE ION(Non-functional Binders)
ACT.10: 6 residues within 4Å:- Chain A: F.45, K.95, L.102, R.176, F.336
- Ligands: CL.1
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:L.102, A:F.336
- Hydrogen bonds: A:K.95
- Salt bridges: A:R.176
ACT.20: 6 residues within 4Å:- Chain B: F.45, K.95, L.102, R.176, F.336
- Ligands: CL.11
4 PLIP interactions:4 interactions with chain B- Hydrophobic interactions: B:L.102, B:F.336
- Hydrogen bonds: B:K.95
- Salt bridges: B:R.176
ACT.30: 6 residues within 4Å:- Chain C: F.45, K.95, L.102, R.176, F.336
- Ligands: CL.21
4 PLIP interactions:4 interactions with chain C- Hydrophobic interactions: C:L.102, C:F.336
- Hydrogen bonds: C:K.95
- Salt bridges: C:R.176
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kleinboelting, S. et al., Crystal Structures of Human Soluble Adenylyl Cyclase Reveal Mechanisms of Catalysis and of its Activation Through Bicarbonate. Proc.Natl.Acad.Sci.USA (2014)
- Release Date
- 2014-03-05
- Peptides
- ADENYLATE CYCLASE TYPE 10: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x CL: CHLORIDE ION(Non-functional Binders)
- 3 x GOL: GLYCEROL(Non-functional Binders)
- 3 x POP: PYROPHOSPHATE 2-(Non-covalent)
- 12 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 3 x MG: MAGNESIUM ION(Non-covalent)
- 3 x ACT: ACETATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kleinboelting, S. et al., Crystal Structures of Human Soluble Adenylyl Cyclase Reveal Mechanisms of Catalysis and of its Activation Through Bicarbonate. Proc.Natl.Acad.Sci.USA (2014)
- Release Date
- 2014-03-05
- Peptides
- ADENYLATE CYCLASE TYPE 10: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A