SMTL ID : 4cup.1

Crystal structure of human BAZ2B in complex with fragment-1 N09421

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.88 Å

Oligo State

homo-dimer

Ligands

2 x ZYB: 4-Fluorobenzamidoxime(Non-covalent)

ZYB.1: 6 residues within 4Å: Chain A: V.38, V.43, F.88, N.89, I.95 Ligands: MOH.2 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.88, A:I.95 Hydrogen bonds: A:N.89 ZYB.5: 6 residues within 4Å: Chain B: V.38, V.43, F.88, N.89, I.95 Ligands: MOH.6 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:F.88, B:I.95 Hydrogen bonds: B:N.89

6 x MOH: METHANOL(Non-functional Binders)

MOH.2: 3 residues within 4Å: Chain A: N.89, I.95 Ligands: ZYB.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.89, A:N.89 MOH.3: 3 residues within 4Å: Chain A: L.15, L.63, S.64 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.63 MOH.4: 1 residues within 4Å: Chain A: A.16 No protein-ligand interaction detected (PLIP) MOH.6: 3 residues within 4Å: Chain B: N.89, I.95 Ligands: ZYB.5 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.89, B:N.89 MOH.7: 3 residues within 4Å: Chain B: L.15, L.63, S.64 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:L.63 MOH.8: 1 residues within 4Å: Chain B: A.16 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

R Bradley, A. et al., Crystal Structure of Human Baz2B in Complex with Fragment-1 N09421. To be Published

Release Date

2014-04-02

Peptides

BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN PROTEIN 2B: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN PROTEIN 2B

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