SMTL ID : 4d50.2 (1 other biounit)

Structure of human deoxyhypusine hydroxylase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

2 x FE: FE (III) ION(Non-covalent)

FE.1: 5 residues within 4Å: Chain A: H.94, E.95, H.212 Ligands: FE.2, PER.3 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.94, A:E.95, A:H.212, H2O.1, H2O.1 FE.2: 5 residues within 4Å: Chain A: H.61, H.245, E.246 Ligands: FE.1, PER.3 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.61, A:H.245, A:E.246, H2O.1, H2O.1

1 x PER: PEROXIDE ION(Non-covalent)

PER.3: 10 residues within 4Å: Chain A: H.61, M.91, H.94, E.95, H.212, M.242, H.245, E.246 Ligands: FE.1, FE.2 No protein-ligand interaction detected (PLIP)

1 x GAI: GUANIDINE(Non-covalent)

GAI.4: 4 residues within 4Å: Chain A: E.9, G.40, G.41, P.42 3 PLIP interactions: 3 interactions with chain A Water bridges: A:E.9, A:L.39 Salt bridges: A:E.9

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Han, Z. et al., Crystal Structure of the Peroxo-Diiron(III) Intermediate of Deoxyhypusine Hydroxylase, an Oxygenase Involved in Hypusination. Structure (2015)

Release Date

2015-04-15

Peptides

DEOXYHYPUSINE HYDROXYLASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

DEOXYHYPUSINE HYDROXYLASE

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