SMTL ID : 4d7b.1

Structure of human transthyretin in complex with Tolcapone

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.15 Å

Oligo State

homo-tetramer

Ligands

4 x TCW: Tolcapone(Non-covalent)

TCW.1: 13 residues within 4Å: Chain B: K.16, L.18, A.109, L.111, S.118, T.119, T.120 Chain D: K.16, L.18, A.109, L.111, T.120 Ligands: TCW.3 7 PLIP interactions: 5 interactions with chain B, 2 interactions with chain D Hydrophobic interactions: B:L.18, B:L.18, B:A.109, B:L.111, D:A.109 Hydrogen bonds: B:K.16, D:K.16 TCW.2: 12 residues within 4Å: Chain A: K.16, L.18, T.107, A.109, L.111, S.118, T.119 Chain C: K.16, A.109, L.111, T.120 Ligands: TCW.4 11 PLIP interactions: 6 interactions with chain A, 5 interactions with chain C Hydrophobic interactions: A:L.18, A:A.109, A:L.111, C:A.109, C:L.111 Hydrogen bonds: A:K.16, A:K.16, C:K.16 Water bridges: A:K.16, C:T.107, C:T.107 TCW.3: 13 residues within 4Å: Chain B: K.16, L.18, A.109, L.111, T.120 Chain D: K.16, L.18, A.109, L.111, S.118, T.119, T.120 Ligands: TCW.1 7 PLIP interactions: 2 interactions with chain B, 5 interactions with chain D Hydrophobic interactions: B:A.109, D:L.18, D:L.18, D:A.109, D:L.111 Hydrogen bonds: B:K.16, D:K.16 TCW.4: 12 residues within 4Å: Chain A: K.16, A.109, L.111, T.120 Chain C: K.16, L.18, T.107, A.109, L.111, S.118, T.119 Ligands: TCW.2 11 PLIP interactions: 5 interactions with chain A, 6 interactions with chain C Hydrophobic interactions: A:A.109, A:L.111, C:L.18, C:A.109, C:L.111 Hydrogen bonds: A:K.16, C:K.16, C:K.16 Water bridges: A:T.107, A:T.107, C:K.16

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Reverter, D. et al., Repositioning Tolcapone as a Potent Inhibitor of Transthyretin Amyloidogenesis and its Associated Cellular Toxicity. Nat.Commun. (2016)

Release Date

2016-01-20

Peptides

TRANSTHYRETIN: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

TRANSTHYRETIN

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