SMTL ID : 4f7l.1

Crystal structure of human CDK8/CYCC in complex with compound 2 (tert-butyl [3-({[3-tert-butyl-1-(4-methylphenyl)-1H-pyrazol-5-yl]carbamoyl}amino)propyl]carbamate)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 0SO: tert-butyl [3-({[3-tert-butyl-1-(4-methylphenyl)-1H-pyrazol-5-yl]carbamoyl}amino)propyl]carbamate(Non-covalent)

0SO.1: 19 residues within 4Å: Chain A: V.29, Y.34, V.37, A.52, K.54, S.64, R.67, E.68, L.72, L.75, I.81, F.99, Y.101, H.151, L.160, I.173, A.174, D.175, R.358 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:V.29, A:Y.34, A:K.54, A:E.68, A:L.75, A:Y.101, A:L.160, A:I.173 Hydrogen bonds: A:K.54, A:K.54, A:E.68, A:D.175

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schneider, E.V. et al., Structure-kinetic relationship study of CDK8/CycC specific compounds. Proc.Natl.Acad.Sci.USA (2013)

Release Date

2013-05-01

Peptides

Cyclin-dependent kinase 8: A
Cyclin-C: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Cyclin-dependent kinase 8

Cyclin-C

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