- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x PN4: (2R)-2,4-dihydroxy-3,3-dimethyl-N-[3-oxo-3-(pentylamino)propyl]butanamide(Non-covalent)
PN4.2: 15 residues within 4Å:- Chain A: D.145, L.148, K.163, G.164, H.195, Y.198, L.219, Y.258, Y.276, F.277, Y.280, L.295, I.299, N.300
- Ligands: UNX.3
17 PLIP interactions:17 interactions with chain A- Hydrophobic interactions: A:L.148, A:Y.198, A:Y.198, A:Y.276, A:Y.276, A:F.277, A:Y.280, A:L.295, A:I.299
- Hydrogen bonds: A:Y.198, A:Y.198, A:N.300, A:N.300
- Water bridges: A:D.145, A:D.145, A:D.145, A:Y.193
PN4.5: 15 residues within 4Å:- Chain B: V.115, D.145, K.163, G.164, H.195, Y.198, L.219, Y.258, Y.276, F.277, Y.280, L.295, I.299, N.300
- Ligands: UNX.12
16 PLIP interactions:16 interactions with chain B- Hydrophobic interactions: B:Y.198, B:Y.198, B:Y.276, B:F.277, B:F.277, B:Y.280, B:L.295, B:I.299
- Hydrogen bonds: B:Y.198, B:Y.258, B:N.300, B:N.300
- Water bridges: B:D.145, B:D.145, B:D.145, B:H.195
- 8 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)
UNX.3: 4 residues within 4Å:- Chain A: H.195, R.261
- Ligands: ADP.1, PN4.2
No protein-ligand interaction detected (PLIP)UNX.6: 2 residues within 4Å:- Chain B: R.314, R.333
No protein-ligand interaction detected (PLIP)UNX.7: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)UNX.8: 1 residues within 4Å:- Chain B: W.38
No protein-ligand interaction detected (PLIP)UNX.9: 2 residues within 4Å:- Chain A: K.334
- Chain B: L.94
No protein-ligand interaction detected (PLIP)UNX.10: 2 residues within 4Å:- Chain B: R.42, D.43
No protein-ligand interaction detected (PLIP)UNX.11: 5 residues within 4Å:- Chain B: T.143, T.144, D.145, E.217, G.218
No protein-ligand interaction detected (PLIP)UNX.12: 5 residues within 4Å:- Chain B: V.115, H.195, R.261
- Ligands: ADP.4, PN4.5
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Li, B. et al., Crystal structures of Klebsiella pneumoniae pantothenate kinase in complex with N-substituted pantothenamides. Proteins (2013)
- Release Date
- 2013-04-10
- Peptides
- Pantothenate kinase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x PN4: (2R)-2,4-dihydroxy-3,3-dimethyl-N-[3-oxo-3-(pentylamino)propyl]butanamide(Non-covalent)
- 8 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Li, B. et al., Crystal structures of Klebsiella pneumoniae pantothenate kinase in complex with N-substituted pantothenamides. Proteins (2013)
- Release Date
- 2013-04-10
- Peptides
- Pantothenate kinase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
C