- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x PN4: (2R)-2,4-dihydroxy-3,3-dimethyl-N-[3-oxo-3-(pentylamino)propyl]butanamide(Non-covalent)
PN4.2: 16 residues within 4Å:- Chain A: V.115, D.145, L.148, K.163, G.164, H.195, Y.198, L.219, Y.258, Y.276, F.277, Y.280, I.299, N.300
- Ligands: UNX.7, UNX.9
16 PLIP interactions:16 interactions with chain A- Hydrophobic interactions: A:L.148, A:Y.198, A:Y.198, A:Y.276, A:F.277, A:Y.280, A:I.299
- Hydrogen bonds: A:H.195, A:Y.198, A:Y.258, A:N.300, A:N.300
- Water bridges: A:D.145, A:D.145, A:Y.169, A:H.195
PN4.11: 15 residues within 4Å:- Chain B: D.145, L.148, K.163, G.164, H.195, Y.198, L.219, Y.258, F.262, Y.276, F.277, L.295, I.299, N.300
- Ligands: UNX.19
16 PLIP interactions:16 interactions with chain B- Hydrophobic interactions: B:L.148, B:Y.198, B:L.219, B:F.262, B:Y.276, B:F.277, B:L.295, B:I.299
- Hydrogen bonds: B:Y.198, B:Y.198, B:N.300, B:N.300
- Water bridges: B:D.145, B:D.145, B:D.145, B:Y.193
- 15 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)
UNX.3: 3 residues within 4Å:- Chain A: R.314, S.316, R.333
No protein-ligand interaction detected (PLIP)UNX.4: 2 residues within 4Å:- Chain A: I.142, T.143
No protein-ligand interaction detected (PLIP)UNX.5: 5 residues within 4Å:- Chain A: E.251, E.252, K.255, W.296, L.301
No protein-ligand interaction detected (PLIP)UNX.6: 3 residues within 4Å:- Chain A: H.233, H.234, V.235
No protein-ligand interaction detected (PLIP)UNX.7: 4 residues within 4Å:- Chain A: H.195, R.261
- Ligands: ADP.1, PN4.2
No protein-ligand interaction detected (PLIP)UNX.8: 6 residues within 4Å:- Chain A: T.143, T.144, D.145, E.217, G.218
- Ligands: UNX.9
No protein-ligand interaction detected (PLIP)UNX.9: 5 residues within 4Å:- Chain A: K.119, D.145, E.217
- Ligands: PN4.2, UNX.8
No protein-ligand interaction detected (PLIP)UNX.12: 2 residues within 4Å:- Chain B: S.316
- Ligands: UNX.13
No protein-ligand interaction detected (PLIP)UNX.13: 1 residues within 4Å:- Ligands: UNX.12
No protein-ligand interaction detected (PLIP)UNX.14: 3 residues within 4Å:- Chain B: K.58, S.65, L.66
No protein-ligand interaction detected (PLIP)UNX.15: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)UNX.16: 3 residues within 4Å:- Chain B: F.165, P.166, Q.167
No protein-ligand interaction detected (PLIP)UNX.17: 2 residues within 4Å:- Chain B: H.172, R.173
No protein-ligand interaction detected (PLIP)UNX.18: 4 residues within 4Å:- Chain B: D.248, A.249, L.309, R.312
No protein-ligand interaction detected (PLIP)UNX.19: 4 residues within 4Å:- Chain B: H.195, R.261
- Ligands: ADP.10, PN4.11
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Li, B. et al., Crystal structures of Klebsiella pneumoniae pantothenate kinase in complex with N-substituted pantothenamides. Proteins (2013)
- Release Date
- 2013-04-10
- Peptides
- Pantothenate kinase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x PN4: (2R)-2,4-dihydroxy-3,3-dimethyl-N-[3-oxo-3-(pentylamino)propyl]butanamide(Non-covalent)
- 15 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Li, B. et al., Crystal structures of Klebsiella pneumoniae pantothenate kinase in complex with N-substituted pantothenamides. Proteins (2013)
- Release Date
- 2013-04-10
- Peptides
- Pantothenate kinase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
D