SMTL ID : 4gdk.1

Crystal Structure of Human Atg12~Atg5 Conjugate in Complex with an N-terminal Fragment of Atg16L1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-oligomer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 3 residues within 4Å: Chain B: A.95, P.97, N.99 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:P.97, B:N.99 NA.2: 3 residues within 4Å: Chain E: A.95, P.97, N.99 1 PLIP interactions: 1 interactions with chain E Hydrogen bonds: E:A.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Otomo, C. et al., Structure of the human ATG12~ATG5 conjugate required for LC3 lipidation in autophagy. Nat.Struct.Mol.Biol. (2013)

Release Date

2012-12-05

Peptides

Ubiquitin-like protein ATG12: AD
Autophagy protein 5: BE
Autophagy-related protein 16-1: CF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D
D

B
B

E
E

C
C

F
F

Ubiquitin-like protein ATG12

Autophagy protein 5

Autophagy-related protein 16-1

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