SMTL ID : 4gm8.1 (3 other biounits)

Crystal structure of human WD repeat domain 5 with compound MM-102

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x ALQ- 0XL- ARG- AC5- 0XN: MM-102(Non-covalent)

ALQ-0XL-ARG-AC5-0XN.1: 16 residues within 4Å: Chain A: V.27, S.28, A.44, G.68, I.69, S.70, D.86, Y.110, F.112, F.128, K.238, Y.239, C.240, F.242, I.284, L.300 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:Y.110, A:F.112, A:F.112, A:F.112, A:F.128, A:Y.239, A:L.300 Hydrogen bonds: A:S.70, A:D.86, A:F.112, A:C.240 Salt bridges: A:D.71

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Karatas, H. et al., High-affinity, small-molecule peptidomimetic inhibitors of MLL1/WDR5 protein-protein interaction. J.Am.Chem.Soc. (2013)

Release Date

2013-07-31

Peptides

WD repeat-containing protein 5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

WD repeat-containing protein 5

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