SMTL ID : 6e23.1 (1 other biounit)

Displacement of WDR5 from chromatin by a pharmacological WIN site inhibitor with picomolar affinity

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.66 Å

Oligo State

monomer

Ligands

1 x HLJ: N-[(3,4-dichlorophenyl)methyl]-3-(6-fluoro-2-methylpyridin-3-yl)-5-{[(2E)-2-imino-3-methyl-2,3-dihydro-1H-imidazol-1-yl]methyl}benzamide(Non-covalent)

HLJ.1: 18 residues within 4Å: Chain A: S.28, A.44, G.68, I.69, S.70, D.71, D.86, F.112, C.113, F.128, P.152, S.154, Y.170, K.238, Y.239, C.240, F.242, I.284 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.112, A:F.128, A:I.284, A:I.284 Hydrogen bonds: A:C.240, A:C.240 pi-Stacking: A:F.112, A:F.112, A:F.242

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Aho, E.R. et al., Displacement of WDR5 from Chromatin by a WIN Site Inhibitor with Picomolar Affinity. Cell Rep (2019)

Release Date

2019-03-13

Peptides

WD repeat-containing protein 5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

WD repeat-containing protein 5

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