SMTL ID : 4gn7.2 (1 other biounit)

mouse SMP30/GNL

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain A: E.18, N.103, N.154, D.204 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.18, A:D.204, H2O.5, H2O.6

7 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 1 residues within 4Å: Chain A: R.15 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.15 SO4.3: 3 residues within 4Å: Chain A: R.234, Q.236, T.237 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.237 Water bridges: A:T.237, A:T.237 Salt bridges: A:R.234 SO4.4: 2 residues within 4Å: Chain A: R.223, K.239 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.223, A:R.223 Salt bridges: A:R.223, A:K.239 SO4.5: 4 residues within 4Å: Chain A: P.124, N.220, K.244, G.266 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.220 Water bridges: A:G.266 Salt bridges: A:K.244 SO4.6: 4 residues within 4Å: Chain A: R.112, F.138, P.139, Q.183 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.112 SO4.7: 1 residues within 4Å: Chain A: N.268 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.268 SO4.8: 3 residues within 4Å: Chain A: R.41, W.82, E.83 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.83 Water bridges: A:W.82 Salt bridges: A:R.41

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Aizawa, S. et al., Structural basis of the gamma-lactone-ring formation in ascorbic acid biosynthesis by the senescence marker protein-30/gluconolactonase. Plos One (2013)

Release Date

2013-04-10

Peptides

Regucalcin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Regucalcin

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