SMTL ID : 4gov.1 (2 other biounits)

The crystal structure of human fascin 1 S39D mutant

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

2 x BR: BROMIDE ION(Non-covalent)

BR.1: 2 residues within 4Å: Chain A: T.125, V.126 Ligand excluded by PLIP BR.2: 5 residues within 4Å: Chain A: R.82, G.86, P.87, D.88, C.89 Ligand excluded by PLIP

5 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain A: T.115, E.116, R.118 Ligand excluded by PLIP CL.4: 3 residues within 4Å: Chain A: R.82, E.83, V.84 Ligand excluded by PLIP CL.5: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.6: 3 residues within 4Å: Chain A: R.167, D.168, V.169 Ligand excluded by PLIP CL.7: 3 residues within 4Å: Chain A: P.51, P.52, R.90 Ligand excluded by PLIP

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.8: 11 residues within 4Å: Chain A: W.340, D.342, R.344, I.345, M.378, G.421, A.422, Y.423, F.451, F.452, F.453 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.344, A:F.453, A:F.453 GOL.9: 8 residues within 4Å: Chain A: K.379, L.380, I.381, N.382, R.383, P.384, L.416, F.418 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:I.381, A:R.383 Water bridges: A:F.418 GOL.10: 4 residues within 4Å: Chain A: Y.145, V.147, K.150, K.220 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:V.147, A:K.150, A:K.220, A:K.220

1 x DTT: 2,3-DIHYDROXY-1,4-DITHIOBUTANE(Non-covalent)

DTT.11: 7 residues within 4Å: Chain A: S.57, A.58, R.217, S.218, G.219, K.220, L.253 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.57, A:S.218, A:S.218

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, S. et al., Molecular mechanism of fascin function in filopodial formation. J.Biol.Chem. (2013)

Release Date

2012-11-28

Peptides

Fascin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fascin

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