SMTL ID : 4gvf.1 (1 other biounit)

Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) bound to GlcNAc

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

monomer

Ligands

1 x NDG: 2-acetamido-2-deoxy-alpha-D-glucopyranose(Non-covalent)

NDG.1: 12 residues within 4Å: Chain A: I.30, F.32, D.62, F.117, R.133, K.163, H.164, H.168, M.210, D.248, L.277 Ligands: NAG.2 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.133, A:R.133, A:K.163, A:H.164 Water bridges: A:H.168, A:D.248

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)

NAG.2: 12 residues within 4Å: Chain A: I.30, F.32, D.62, F.117, R.133, K.163, H.164, H.168, M.210, D.248, L.277 Ligands: NDG.1 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:R.133, A:R.133, A:K.163, A:H.164 Water bridges: A:H.168, A:D.248, A:D.248, A:D.248

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bacik, J.P. et al., Active Site Plasticity within the Glycoside Hydrolase NagZ Underlies a Dynamic Mechanism of Substrate Distortion. Chem.Biol. (2012)

Release Date

2012-12-19

Peptides

Beta-hexosaminidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-hexosaminidase

Related Entries With Identical Sequence