- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.53 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x MN: MANGANESE (II) ION(Non-covalent)
- 3 x ZN: ZINC ION(Non-covalent)
ZN.3: 3 residues within 4Å:- Chain A: H.141, E.277
- Ligands: ABH.4
3 PLIP interactions:2 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:H.141, A:E.277, H2O.1
ZN.7: 3 residues within 4Å:- Chain B: H.141, E.277
- Ligands: ABH.8
3 PLIP interactions:2 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:H.141, B:E.277, H2O.4
ZN.11: 3 residues within 4Å:- Chain C: H.141, E.277
- Ligands: ABH.12
3 PLIP interactions:2 interactions with chain C, 1 Ligand-Water interactions- Metal complexes: C:H.141, C:E.277, H2O.8
- 3 x ABH: 2(S)-AMINO-6-BORONOHEXANOIC ACID(Non-covalent)
ABH.4: 17 residues within 4Å:- Chain A: H.101, D.124, H.126, D.128, N.130, S.137, H.141, G.142, D.183, E.186, D.232, D.234, T.246, E.277
- Ligands: MN.1, MN.2, ZN.3
11 PLIP interactions:11 interactions with chain A- Hydrogen bonds: A:N.130, A:S.137, A:D.183, A:D.183
- Water bridges: A:D.128, A:S.137, A:N.139, A:N.139, A:N.139, A:T.246, A:T.246
ABH.8: 17 residues within 4Å:- Chain B: H.101, D.124, H.126, D.128, N.130, S.137, H.141, G.142, D.183, E.186, D.232, D.234, T.246, E.277
- Ligands: MN.5, MN.6, ZN.7
11 PLIP interactions:11 interactions with chain B- Hydrogen bonds: B:N.130, B:S.137, B:D.183, B:D.183
- Water bridges: B:D.128, B:S.137, B:N.139, B:N.139, B:N.139, B:T.246, B:T.246
ABH.12: 17 residues within 4Å:- Chain C: H.101, D.124, H.126, D.128, N.130, S.137, H.141, G.142, D.183, E.186, D.232, D.234, T.246, E.277
- Ligands: MN.9, MN.10, ZN.11
11 PLIP interactions:11 interactions with chain C- Hydrogen bonds: C:N.130, C:S.137, C:D.183, C:D.183
- Water bridges: C:D.128, C:S.137, C:N.139, C:N.139, C:N.139, C:T.246, C:T.246
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- D'Antonio, E.L. et al., Structure and function of non-native metal clusters in human arginase I. Biochemistry (2012)
- Release Date
- 2012-09-26
- Peptides
- Arginase-1: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A
SMTL ID : 4gwd.1 (1 other biounit)
Crystal Structure of the Mn2+2,Zn2+-Human Arginase I-ABH Complex
Arginase-1
Toggle Identical (ABC)Related Entries With Identical Sequence
1wva.1 | 1wva.2 | 2aeb.1 | 2aeb.2 | 2pha.1 | 2pha.2 | 2pha.3 | 2pho.1 | 2pho.2 | 2pho.3 | 2pll.1 | 2pll.2 | 2pll.3 | 2zav.1 | 2zav.2 | 3dj8.1 | 3dj8.2 | 3f80.1 | 3f80.2 | 3gmz.1 | 3gmz.2 | 3gn0.1 | 3gn0.2 | 3kv2.1 | 3kv2.2 | 3lp4.1 | 3lp4.2 | 3lp7.1 | 3lp7.2 | 3mfv.1 more...less...3mfv.2 | 3mfw.1 | 3mfw.2 | 3mjl.1 | 3mjl.2 | 3sjt.1 | 3sjt.2 | 3skk.1 | 3skk.2 | 3tf3.1 | 3tf3.2 | 3th7.1 | 3th7.2 | 3the.1 | 3the.2 | 3thh.1 | 3thh.2 | 3thj.1 | 3thj.2 | 4fci.1 | 4fci.2 | 4fck.1 | 4fck.2 | 4gsm.1 | 4gsm.2 | 4gsv.1 | 4gsv.2 | 4gsz.1 | 4gsz.2 | 4gwc.1 | 4gwc.2 | 4gwd.2 | 6v7c.1 | 6v7c.2 | 6v7d.1 | 6v7d.2 | 6v7e.1 | 6v7e.2 | 6v7f.1 | 6v7f.2 | 7k4g.1 | 7k4g.2 | 7k4h.1 | 7k4h.2 | 7k4i.1 | 7k4i.2 | 7k4j.1 | 7k4j.2 | 7k4k.1 | 7k4k.2 | 7klk.1 | 7klk.2 | 7kll.1 | 7kll.2 | 7klm.1 | 7klm.2 | 7lex.1 | 7ley.1 | 7lez.1 | 7lf0.1 | 7lf1.1 | 7lf2.1 | 8aup.1 | 8aup.2 | 8e5m.1 | 8e5m.2 | 8e5n.1 | 8e5n.2