- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.17 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x MN: MANGANESE (II) ION(Non-covalent)
- 3 x O93: 2-[(1~{R},3~{R},4~{S})-3-azanyl-3-carboxy-4-[(dimethylamino)methyl]cyclohexyl]ethyl-$l^{3}-oxidanyl-bis(oxidanyl)boron(Non-covalent)
O93.3: 16 residues within 4Å:- Chain A: H.101, D.124, H.126, D.128, N.130, T.136, S.137, H.141, D.183, E.186, D.232, D.234, T.246, E.277
- Ligands: MN.1, MN.2
13 PLIP interactions:13 interactions with chain A- Hydrophobic interactions: A:T.246
- Hydrogen bonds: A:N.130, A:S.137, A:D.183, A:D.234, A:E.277
- Water bridges: A:D.128, A:T.135, A:T.135, A:S.137, A:S.137, A:N.139
- Salt bridges: A:D.183
O93.7: 17 residues within 4Å:- Chain B: H.101, D.124, H.126, D.128, N.130, T.136, S.137, H.141, G.142, D.183, E.186, D.232, D.234, T.246, E.277
- Ligands: MN.5, MN.6
13 PLIP interactions:13 interactions with chain B- Hydrophobic interactions: B:T.246
- Hydrogen bonds: B:N.130, B:S.137, B:D.183, B:D.234, B:E.277
- Water bridges: B:T.135, B:N.139, B:D.183, B:D.183, B:T.246
- Salt bridges: B:D.181, B:D.183
O93.10: 17 residues within 4Å:- Chain C: H.101, D.124, H.126, D.128, N.130, T.136, S.137, H.141, G.142, D.183, E.186, D.232, D.234, T.246, E.277
- Ligands: MN.8, MN.9
13 PLIP interactions:13 interactions with chain C- Hydrophobic interactions: C:H.126, C:T.246
- Hydrogen bonds: C:N.130, C:S.137, C:H.141, C:D.183, C:T.246, C:T.246, C:E.277
- Water bridges: C:S.137, C:N.139, C:N.139
- Salt bridges: C:D.183
- 1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Borek, B. et al., Arginase 1/2 Inhibitor OATD-02: From Discovery to First-in-man Setup in Cancer Immunotherapy. Mol.Cancer Ther. (2023)
- Release Date
- 2023-03-29
- Peptides
- Arginase-1: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
CC
F
SMTL ID : 8aup.2 (1 other biounit)
Structure of hARG1 with a novel inhibitor.
Arginase-1
Related Entries With Identical Sequence
1wva.1 | 1wva.2 | 2aeb.1 | 2aeb.2 | 2pha.1 | 2pha.2 | 2pha.3 | 2pho.1 | 2pho.2 | 2pho.3 | 2pll.1 | 2pll.2 | 2pll.3 | 2zav.1 | 2zav.2 | 3dj8.1 | 3dj8.2 | 3f80.1 | 3f80.2 | 3gmz.1 | 3gmz.2 | 3gn0.1 | 3gn0.2 | 3kv2.1 | 3kv2.2 | 3lp4.1 | 3lp4.2 | 3lp7.1 | 3lp7.2 | 3mfv.1 more...less...3mfv.2 | 3mfw.1 | 3mfw.2 | 3mjl.1 | 3mjl.2 | 3sjt.1 | 3sjt.2 | 3skk.1 | 3skk.2 | 3tf3.1 | 3tf3.2 | 3th7.1 | 3th7.2 | 3the.1 | 3the.2 | 3thh.1 | 3thh.2 | 3thj.1 | 3thj.2 | 4fci.1 | 4fci.2 | 4fck.1 | 4fck.2 | 4gsm.1 | 4gsm.2 | 4gsv.1 | 4gsv.2 | 4gsz.1 | 4gsz.2 | 4gwc.1 | 4gwc.2 | 4gwd.1 | 4gwd.2 | 6v7c.1 | 6v7c.2 | 6v7d.1 | 6v7d.2 | 6v7e.1 | 6v7e.2 | 6v7f.1 | 6v7f.2 | 7k4g.1 | 7k4g.2 | 7k4h.1 | 7k4h.2 | 7k4i.1 | 7k4i.2 | 7k4j.1 | 7k4j.2 | 7k4k.1 | 7k4k.2 | 7klk.1 | 7klk.2 | 7kll.1 | 7kll.2 | 7klm.1 | 7klm.2 | 7lex.1 | 7ley.1 | 7lez.1 | 7lf0.1 | 7lf1.1 | 7lf2.1 | 8aup.1 | 8e5m.1 | 8e5m.2 | 8e5n.1 | 8e5n.2