- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- homo-tetramer
- Ligands
- 2 x GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-covalent)
- 12 x K: POTASSIUM ION(Non-covalent)(Non-functional Binders)
- 4 x ZN: ZINC ION(Non-covalent)
ZN.7: 4 residues within 4Å:- Chain A: H.356, C.361, C.385, H.388
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:H.356, A:C.361, A:C.385, A:H.388
ZN.10: 4 residues within 4Å:- Chain B: H.356, C.361, C.385, H.388
4 PLIP interactions:4 interactions with chain B- Metal complexes: B:H.356, B:C.361, B:C.385, B:H.388
ZN.23: 4 residues within 4Å:- Chain C: H.356, C.361, C.385, H.388
4 PLIP interactions:4 interactions with chain C- Metal complexes: C:H.356, C:C.361, C:C.385, C:H.388
ZN.26: 4 residues within 4Å:- Chain D: H.356, C.361, C.385, H.388
4 PLIP interactions:4 interactions with chain D- Metal complexes: D:H.356, D:C.361, D:C.385, D:H.388
- 4 x CA: CALCIUM ION(Non-covalent)
CA.8: 6 residues within 4Å:- Chain A: E.446, N.447, Q.450
- Chain B: T.180, N.207, T.211
3 PLIP interactions:2 interactions with chain B, 1 interactions with chain A- Metal complexes: B:T.180, B:T.211, A:E.446
CA.11: 6 residues within 4Å:- Chain B: E.446, N.447, Q.450
- Chain C: T.180, N.207, T.211
3 PLIP interactions:2 interactions with chain C, 1 interactions with chain B- Metal complexes: C:T.180, C:T.211, B:E.446
CA.24: 6 residues within 4Å:- Chain C: E.446, N.447, Q.450
- Chain D: T.180, N.207, T.211
3 PLIP interactions:2 interactions with chain D, 1 interactions with chain C- Metal complexes: D:T.180, D:T.211, C:E.446
CA.27: 6 residues within 4Å:- Chain A: T.180, N.207, T.211
- Chain D: E.446, N.447, Q.450
3 PLIP interactions:2 interactions with chain A, 1 interactions with chain D- Metal complexes: A:T.180, A:T.211, D:E.446
- 6 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.9: 5 residues within 4Å:- Chain A: G.357, R.358, I.359, N.417, R.441
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:R.358, A:I.359
- Water bridges: A:G.360, A:R.441
- Salt bridges: A:R.441
PO4.13: 5 residues within 4Å:- Chain B: G.357, R.358, I.359, N.417, R.441
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:R.358, B:I.359
- Water bridges: B:G.357, B:G.357
- Salt bridges: B:R.441
PO4.14: 5 residues within 4Å:- Chain B: Y.251, R.255, W.306, F.458, V.460
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:W.306, B:W.306
- Water bridges: B:R.255, B:R.255
- Salt bridges: B:R.255
PO4.25: 5 residues within 4Å:- Chain C: G.357, R.358, I.359, N.417, R.441
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:R.358, C:I.359
- Water bridges: C:G.360, C:R.441
- Salt bridges: C:R.441
PO4.29: 5 residues within 4Å:- Chain D: G.357, R.358, I.359, N.417, R.441
5 PLIP interactions:5 interactions with chain D- Hydrogen bonds: D:R.358, D:I.359
- Water bridges: D:G.357, D:G.357
- Salt bridges: D:R.441
PO4.30: 5 residues within 4Å:- Chain D: Y.251, R.255, W.306, F.458, V.460
5 PLIP interactions:5 interactions with chain D- Hydrogen bonds: D:W.306, D:W.306
- Water bridges: D:R.255, D:R.255
- Salt bridges: D:R.255
- 4 x GLC: alpha-D-glucopyranose(Non-covalent)
GLC.15: 5 residues within 4Å:- Chain B: R.246, R.250, H.264, I.265, R.369
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:R.246, B:I.265, B:R.369
- Salt bridges: B:R.246
GLC.16: 3 residues within 4Å:- Chain B: R.39, A.49, Y.50
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:R.39, B:Y.50, B:Y.50
GLC.31: 5 residues within 4Å:- Chain D: R.246, R.250, H.264, I.265, R.369
4 PLIP interactions:4 interactions with chain D- Hydrogen bonds: D:R.246, D:I.265, D:R.369
- Salt bridges: D:R.246
GLC.32: 3 residues within 4Å:- Chain D: R.39, A.49, Y.50
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:R.39, D:Y.50, D:Y.50
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kong, C. et al., Distinct gating mechanisms revealed by the structures of a multi-ligand gated K(+) channel. elife (2012)
- Release Date
- 2012-12-26
- Peptides
- TrkA domain protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- homo-tetramer
- Ligands
- 2 x GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-covalent)
- 12 x K: POTASSIUM ION(Non-covalent)(Non-functional Binders)
- 4 x ZN: ZINC ION(Non-covalent)
- 4 x CA: CALCIUM ION(Non-covalent)
- 6 x PO4: PHOSPHATE ION(Non-functional Binders)
- 4 x GLC: alpha-D-glucopyranose(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kong, C. et al., Distinct gating mechanisms revealed by the structures of a multi-ligand gated K(+) channel. elife (2012)
- Release Date
- 2012-12-26
- Peptides
- TrkA domain protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B - Membrane
-
We predict this structure to be a membrane protein.